Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0708 ATGGGCAGACATGTGTTGGTTATACCATATCCAGCTCAAGGACATGTTAGTCCTCTTATGAAGTTGGCACACCGGATTTCTGATCATGGGATCAAGGTCACTTTTGTTACCACGGAGTCCATACATGCAAGACTTATGGCTGCCATGCCAGACAAGGATGAAGAGCTTAGCCAGATGCAGCTAGTCTCAATCCCAGATCCATGGGTAAATAAAAAAGATTTAGTTCATGTGACTAACAGTATTTTAACAGTCATGCCAGTCCATTTGAAGGACTTGATTGAGAAGGTTAACCAGACAAATGTTGATGAGCAGATCACATATGTTGTTGCTGATACAGCAGTTGGGTGGGCACTGGAGATTGCTAAGAAGATGGGAATTGAGGGATCTGCCCTTTGGCCTGCTGGACCAGTAACTCTGGCTATGGGACTTCACATTCCAAAGCTTATTGAGGCTGGAATCATAGACAGTTATGGAAATCCTATAAAATCTGAGTTGATCCGGCTGTCGAAGGATATCCCTGCGTTTAGCAGCACCAATCTTTCATGGAACTCAACAGATGATCCAACGATTCGGCAAATTTCATTTGAATATGCTTTCAGGCTCAGCCAAACTGCTAAAATTTCCAACTGGCTTCTTTGTAACTCATTCTATGAACTTGACTCATCATCTTTTGATTTGATTCCCAACGTATTAACCCTTGGACCTTTACTTGCAAGCAATCGTCCTGGATCTTCTGCTGGAAACTTGTGGCCTAATGATCCAACTTGCATAAGCTGGCTTGATAAACAACCTGCAGAATCAGTCATTTATGTTGCCTTTGGCAGCACAACATTCTTCAAGCAGAAACAATTCAATGAACTGGCACTGGGAATTGAACTTGTAGGCCGGCCGTTTTTATGGGTTGTCCCTTCAGTTGCTGAATACCCCAATGAGTTCACACAGAGAGTATCCGAGTATGGAAAGATTGTTGGATGGGCAGACCAAGAAAAAGTGTTAGCTCATCCTTCTGTTGCATGTTTTTTTTCCCATTGTGGATGGAACTCAACCATGGAGAGCCTATGCATGGGAGTCCCTTTTCTTTGCTGGCCCCACACTGTTGATCAATTAGACAACAGGTTTTTCATTTGCGATATCTGGAAGGTTGGTTTGGGATTGGATCCAGACGAAAATGGATTGGTTTCAAGACACCAGATTAAGACCAAGATTGAAAACTTGCTTTCTGATGATGGTATAAAAGAAAATGCACTACGGTTAAAGGAAATGGCTAGAAGAAGTGTCTGCCAAGGTGGATCTTCTGCCAATAATTTCAAAACCTTTATTGAAGCATTGCAGAATTGA 1338 0.4238 MGRHVLVIPYPAQGHVSPLMKLAHRISDHGIKVTFVTTESIHARLMAAMPDKDEELSQMQLVSIPDPWVNKKDLVHVTNSILTVMPVHLKDLIEKVNQTNVDEQITYVVADTAVGWALEIAKKMGIEGSALWPAGPVTLAMGLHIPKLIEAGIIDSYGNPIKSELIRLSKDIPAFSSTNLSWNSTDDPTIRQISFEYAFRLSQTAKISNWLLCNSFYELDSSSFDLIPNVLTLGPLLASNRPGSSAGNLWPNDPTCISWLDKQPAESVIYVAFGSTTFFKQKQFNELALGIELVGRPFLWVVPSVAEYPNEFTQRVSEYGKIVGWADQEKVLAHPSVACFFSHCGWNSTMESLCMGVPFLCWPHTVDQLDNRFFICDIWKVGLGLDPDENGLVSRHQIKTKIENLLSDDGIKENALRLKEMARRSVCQGGSSANNFKTFIEALQN* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0708 445 FunFam UDP-glycosyltransferase 83A1 7 247 - -
Vvi17g0708 445 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 443 - -
Vvi17g0708 445 CDD GT1_Gtf-like 4 437 IPR002213 GO:0008194
Vvi17g0708 445 Gene3D Glycogen Phosphorylase B; 244 424 - -
Vvi17g0708 445 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 3 436 - -
Vvi17g0708 445 Gene3D Glycogen Phosphorylase B; 7 435 - -
Vvi17g0708 445 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 259 421 IPR002213 GO:0008194
Vvi17g0708 445 FunFam UDP-glycosyltransferase 83A1 248 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0708 Vvi-Chr17 7861011 7862576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0708 1 440 Glycosyltransferase AT3G02100 39.073 7.19e-111 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0708 - - vvi:100258802 909.442