Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0707 ATGGGCAGGCGACCTCATGTGCTTGTTGTACCATTCCCAGCACAAGGACATGTTGCCCCTCTTATGAAGTTGGCCCACAAAGTCTCTGATCATGGAATCAAGGTAACTTTTGTTAACACAGAGTTCATACATGCAAAAATTATGGCTTCAATGCCAGACAAGGATGGAAAGCAGAGCCGAATCGAGCTAGTCTCAGTCCCTGATGGATTGAATCCAGAAGCAAACCGAAATGATGCAGTTATGCTGACAGAAAGTATTTTAACGGTCATGCCTGGCCATGTTAAGGACTTGATTGAGAAGATCAACCGAACAAATGATGATGAGAAGATCACATGTGTCATTGCTGATACAACAGTTGGGTGGGCACTTGAGGTTGCTGAGAAGATGGGAATCAAGAGAGCTGCAGTTTGGCCTGGTGGACCAGGAGACTTGGCTTTGGCACTTCATATTCCAAAGCTTATTGAGGCCAGAATCATAGATACTGATGGAGCTCCTATGAAAAATGAGTTGATCCATCTGGCTGAGGATATCCCTGCTTTTAGCATCACTGGTCTTTCGTGGAACTTATCAGATGACCCGAAGATCCGAGATGTTATATTTGGATATGCTTTCAGAGTCAGCCAAACTGTCAAACTTTCAAACTGGCTTCTTTGCAACTCATTTTATGAACTTCACTCATCAGCCTGTAACTTGATTTCTGACATACTACCCATTGGCCCTTTACTTGCAAGTAATCATCCTGCTCATTCTGCTGGAAACTTTTGGGCTGAGGATTCAACTTGCCTAAGGTGGCTTGATAAACAACCTGCTGGCTCAGTCATTTATGTTGCCTTTGGCAGCTTAGCAATCTTAAGCCAGCACCAATTCAATGAACTAGCACTTGGCATTGAACTTGTAGGCCGGCCATTTCTATGGGTGGCCCGATCAGACTTTACTAATGGATCAGCTGTTGAATACCCAGATGGGTTCATGCAGAGAGTTTCTGAGTATGGAAAGATTGTGGAATGGGCAGACCAAGAAAAGGTGTTAGCTCACCCTTCTGTTGCATGTTTCTTATCACATTGTGGATGGAACTCAACCATGGAAGGTGTAAGCATGGGAGTTCCTTTTTTATGCTGGCCCCAGTTTGCAGATCAATTCTGCAACCGGAATTTCATATGCGATATCTGGAAGGTTGGTTTGGGATTAGACCCAGATGGAAATGGAATCATATCAAGGCACGAAATTAAGATCAAGATTGAAAAATTGCTTTCTGATGATGGTATAAAAGCAAATGCACTGAAGCTGAAGGAAATGGCTAGAGAAAGTGTGAGTGAAGATGGATCCTCCTCCAAGAATTTCAAAGCCTTTATTGAAGCAGTGAAACATTGA 1371 0.4325 MGRRPHVLVVPFPAQGHVAPLMKLAHKVSDHGIKVTFVNTEFIHAKIMASMPDKDGKQSRIELVSVPDGLNPEANRNDAVMLTESILTVMPGHVKDLIEKINRTNDDEKITCVIADTTVGWALEVAEKMGIKRAAVWPGGPGDLALALHIPKLIEARIIDTDGAPMKNELIHLAEDIPAFSITGLSWNLSDDPKIRDVIFGYAFRVSQTVKLSNWLLCNSFYELHSSACNLISDILPIGPLLASNHPAHSAGNFWAEDSTCLRWLDKQPAGSVIYVAFGSLAILSQHQFNELALGIELVGRPFLWVARSDFTNGSAVEYPDGFMQRVSEYGKIVEWADQEKVLAHPSVACFLSHCGWNSTMEGVSMGVPFLCWPQFADQFCNRNFICDIWKVGLGLDPDGNGIISRHEIKIKIEKLLSDDGIKANALKLKEMARESVSEDGSSSKNFKAFIEAVKH* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0707 456 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 2 454 - -
Vvi17g0707 456 Gene3D Glycogen Phosphorylase B; 9 447 - -
Vvi17g0707 456 Gene3D Glycogen Phosphorylase B; 249 435 - -
Vvi17g0707 456 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 454 - -
Vvi17g0707 456 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 263 432 IPR002213 GO:0008194
Vvi17g0707 456 ProSitePatterns EF-hand calcium-binding domain. 397 409 IPR018247 -
Vvi17g0707 456 FunFam UDP-glycosyltransferase 83A1 253 435 - -
Vvi17g0707 456 CDD GT1_Gtf-like 5 436 IPR002213 GO:0008194
Vvi17g0707 456 FunFam UDP-glycosyltransferase 83A1 9 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0707 Vvi-Chr17 7856461 7857894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0707 4 455 Glycosyltransferase AT3G02100 41.775 1.37e-127 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0707 - - vvi:100253659 931.784