Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0705 ATGGGCAGGCGACCTCATGTGCTGATTATACCGCTCCCAGCGCAAGGACATGTTGCTCCTCTTATGAAGCTTGCACACCGGATTTCTGATCATGGGATCAAGGTCACCTTTGTGAACTCTGACTTCATACATGCTAAACTGCTGGCTGCACTCCCACATGAAGCTGAGGCTCGGAGTGGGATAGGGCTAGCCTCTATCCCAGATGGTCTGGATCCAGGGGACGATCGGAAAAACATGCTCAAGTTAACAGAAAGTATTTCAAGAGTCATGCCGGGTCATTTGAAGGATTTAATTGAGAAAGTAAACCACTCGAATGATGATGAGCAGATCACTTGTGTTATTGCTGACATAACACTTGAGCGGTGGCCAATGGAGGTGGCAGAGAAGATGGGAATCGAAGGGGTCCCTTTTTGTCCTATGGGAGCAGGAATCTGGGCTTTGGCACTTCATATTCCAAAACTAATTGAGGCCGGAATCGTAAATAGTACTGATGGATCTCCTCTGAATGATGAGTTGATCTGCGTGTCGAAGGGTATTCCAGTCTTGAGCAGCAACAGCTTGCCCTGGCAGTGGCCAATTGATCTAAAGATACAAGAGTCGGTTTTCCGACTTTATCTCACATCTATTCAAATTATGGATTCTTCCAAGTGGCTTCTTTGCAACTGTGTTTACGAACTTGACTCATCTGCTTGTGACTTGATTCCTAACTTATTACCAATTGGCCCGTTACTTGCAAGTAGTGATCCGGGTCATTATGCTGCAAACTTTTGGCCTGAGGATTCAACTTGCATAGGCTGGCTCGATAAACAACCTGCTGGCTCAGTCATTTATGTTGCCTTTGGCAGCTTTACAATCTTAACCCAGCACCAATTCAATGAATTAGCACTTGGCATTGAACTTGTAGGGCGGCCATTTTTATGGGTTGTCCGATCAGACTTCACCGATGAATCAGCTGCTGAATACCCAGATGGTTTCATAGAGAGAGTAGCTGACCATGGAAAGATTGTTTCATGGGCACCCCAAGAAGAGGTTTTAGCTCACCCTTCTGTTGCATGTTTCTTTTCCCATTGTGGATGGAACTCAACCATGGGCGGCATAGGCATGGGAGTCCCCTTCCTATGCTGGCCCTACTTAGGAGATCAATTCCATAACCAGAGTTACATATGCGAGAAATGGAAGGTGGGCTTGGGGTTGAACCCAGATAAAAATGGATTCATATCGAGGCATGAGATTAAGATGAAGATTGAAAAGTTGGTCTCTGATGATGGTATAAAAGCAAATGCAGAGAAGTTGAAGGAAATGGCTAGAAAGAGTGTAAGCGAAGGCGGATCTTCTTACAGAAATTTCAAAACCTTTATTGAAGCAATGAAACAATGA 1377 0.4495 MGRRPHVLIIPLPAQGHVAPLMKLAHRISDHGIKVTFVNSDFIHAKLLAALPHEAEARSGIGLASIPDGLDPGDDRKNMLKLTESISRVMPGHLKDLIEKVNHSNDDEQITCVIADITLERWPMEVAEKMGIEGVPFCPMGAGIWALALHIPKLIEAGIVNSTDGSPLNDELICVSKGIPVLSSNSLPWQWPIDLKIQESVFRLYLTSIQIMDSSKWLLCNCVYELDSSACDLIPNLLPIGPLLASSDPGHYAANFWPEDSTCIGWLDKQPAGSVIYVAFGSFTILTQHQFNELALGIELVGRPFLWVVRSDFTDESAAEYPDGFIERVADHGKIVSWAPQEEVLAHPSVACFFSHCGWNSTMGGIGMGVPFLCWPYLGDQFHNQSYICEKWKVGLGLNPDKNGFISRHEIKMKIEKLVSDDGIKANAEKLKEMARKSVSEGGSSYRNFKTFIEAMKQ* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0705 458 Gene3D Glycogen Phosphorylase B; 9 449 - -
Vvi17g0705 458 FunFam UDP-glycosyltransferase 83A1 9 253 - -
Vvi17g0705 458 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 456 - -
Vvi17g0705 458 FunFam UDP-glycosyltransferase 83A1 254 437 - -
Vvi17g0705 458 Gene3D Glycogen Phosphorylase B; 251 437 - -
Vvi17g0705 458 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 2 456 - -
Vvi17g0705 458 CDD GT1_Gtf-like 5 438 IPR002213 GO:0008194
Vvi17g0705 458 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 272 434 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0705 Vvi-Chr17 7802591 7804070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0705 4 457 Glycosyltransferase AT3G02100 41.685 2.69e-122 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0705 - - vvi:100255230 940.643