Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0704 ATGGGAGCAGGAATCTGGGCTTTGGCACTTCATATTCCAAAGCTAATTGAGGCCGGAATCGTAAATAGTACTGATGGAACTCCTCTGAAAGATGAGTTGATCTGCGTGTCGAAGGGTATTCCAGTCTTGAGCTGCAACGGCTTGCCCTGGAAGTGGCCAATTGATCTGAAGGTACAAGAGTGGGTTTTCCGAATTTATCTCACATCTATTCAATTTATGAATTCTTCCAAGAGGCTTCTTTGCAACTGTGTTTACGAACTTGACTCATCTGCTTGTGACTTGATTCCTAACTTATTACCAATTGGCCCGTTACCTGCAAGTCGTGATCCGGGTCATTATGCTGCAAACTTTTGGCCTGAGGATTCAACTTGCATAGGCTGGCTCGATAAACAACCTGCTGGCTCAGTCATTTATGTTGCTTTTGGCAGCACCGGAAACTTAACCCAGCACCAATTCAATGAATTAGCACTTGGTATTGAACTTGTAGGGCGGCCATTTTTATGGGTTGTCCGATCAGACTTCACCGATGGGTCAGCTGCTGAATACCCTGATGGTTTCATTGAGAGAGTAGCTGACCATGGAAAGATTGTTTCGTGGGCACCCCAAGAAGAGGTTTTAGCTCACCCTTCTGTTGCATGTTTCTTTTCCCATTGCGGTTGGAACTCAACCATGGACAGCATAATCATGGGAGTCCCCTTCCTATGCTGGCCCTACGTTGGAGATCAATTCCTTGACCAGAATTACATATGCGACAAATGGAAGGTGGGGTTGGGGTTGAACCCAGATGAAAATGGACTCATATCGAGGCATGAGATTAAGATGAAGATCGAAAAGTTGGTCTCTGATGATGTGTTGGCAGCAACCATGGGCAGGCGACCTCATGTGCTGATTATTCCATTCCCAGCACAAGGACATGTTGCTCCCCTTATGAAGTTTGCGTACCAGATTTCTGATCATGGGATCAAGGTCACCTTTGTTAACTCAGACTTCATACATGAAAAACTGGTGGCTGCACTGCCAGATGAGGATGAGGCTCGGAGTCGGATAGGGCTAGCCTCGATCCCAGATGGACTGGGTCCGGGGGAGGATCGAAAAGATTCGCTCAAGTTGACAGACAGTATTTTTAGAGTCATGCCGGGTCATTTGAAGGAGTTTATGGAGAAGGTTAACAACTCGAATGATGATGAGAAGATCACTTGTGTTATTGCTGATTCAGCATTTGGGTGGGCGCTAGAGGTTGCCGACAAGATGGGGATCAAGAGGGTCGCGTTTTGCCCCTTTGGACCAGGAAGCTTGGCTTTGGCATTTCACATTCCAAGGCTTATTGAGGCCGGACTTCTAAATAGTACTGATGGATCTCTTTTGAACGACGAGTTGATCTGCCTGGCAAAGGATATACCAGCCTTTAGCAGCAACAGATTGCCGTGGAGCTGCCCGAGTGATCCAACCTTACAAGAGGTCATTTTCCGACTTGCTTTCAAAGACATCTCAGCTATTAATCTTTCCAATTGGCTTATTTGCAACTCCGTTTACGAACTTGACTCATCTGCTTGTGACTTGATTCCCAACATATTACCAATAGGCCCGTTAATTGCAAATAACCATCTGGGTCATTATCCTGGAAACTTTTGGCCTGAGGATTCAACTTGCATAAGCTGGCTCGATAAACAACCTGCTGGCTCAGTCATTTATGTTGCCTTTGGAAGCCTAGCGATCTTAAGCCAGCACCAATTCAATGAACTAGCACTGGGTATTGAACTTGTAGGCCGGCCATTTTTATGGGTTGTCCGATCAGACTTCACCAATGGATCAGATGCTGAATACCCTGATGGTTTCATAGAGAGAGTTGCTGAGAATGGAAAGATTGTTTCATGGGCACCCCAAGAAAAAGTTTTAGCTCACCCTTCTGTTGCATGTTTCTTATCCCATTGTGGATGGAACTCAACCATGGACGGCATAGGCATGGGAGTCCCCTTCCTATGCTGGCCCTACGTTGTAGATCAATTCCATAACCAGAGTTACATATGCGACAAGTGGAAGGTGGGCTTGGGGTTGAACCCAGATGAAAATGGATTCATATCAAGGCATGAGATTAAGAAGAAGATCGAAATGTTGGTTTCTGATGATGTTATAAAAGCAAATGCAGAGAAGTTGAAGGAAATGACTAGAAAGAGTGTGAGTGAAGGTGGATCTTCTTACAAGAATTTCCAAACCTTTGTTGAAGTAATGAAACAATGA 2238 0.4517 MGAGIWALALHIPKLIEAGIVNSTDGTPLKDELICVSKGIPVLSCNGLPWKWPIDLKVQEWVFRIYLTSIQFMNSSKRLLCNCVYELDSSACDLIPNLLPIGPLPASRDPGHYAANFWPEDSTCIGWLDKQPAGSVIYVAFGSTGNLTQHQFNELALGIELVGRPFLWVVRSDFTDGSAAEYPDGFIERVADHGKIVSWAPQEEVLAHPSVACFFSHCGWNSTMDSIIMGVPFLCWPYVGDQFLDQNYICDKWKVGLGLNPDENGLISRHEIKMKIEKLVSDDVLAATMGRRPHVLIIPFPAQGHVAPLMKFAYQISDHGIKVTFVNSDFIHEKLVAALPDEDEARSRIGLASIPDGLGPGEDRKDSLKLTDSIFRVMPGHLKEFMEKVNNSNDDEKITCVIADSAFGWALEVADKMGIKRVAFCPFGPGSLALAFHIPRLIEAGLLNSTDGSLLNDELICLAKDIPAFSSNRLPWSCPSDPTLQEVIFRLAFKDISAINLSNWLICNSVYELDSSACDLIPNILPIGPLIANNHLGHYPGNFWPEDSTCISWLDKQPAGSVIYVAFGSLAILSQHQFNELALGIELVGRPFLWVVRSDFTNGSDAEYPDGFIERVAENGKIVSWAPQEKVLAHPSVACFLSHCGWNSTMDGIGMGVPFLCWPYVVDQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEMLVSDDVIKANAEKLKEMTRKSVSEGGSSYKNFQTFVEVMKQ* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0704 745 Gene3D Glycogen Phosphorylase B; 1 111 - -
Vvi17g0704 745 Gene3D Glycogen Phosphorylase B; 297 736 - -
Vvi17g0704 745 CDD GT1_Gtf-like 94 284 IPR002213 GO:0008194
Vvi17g0704 745 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 134 254 IPR002213 GO:0008194
Vvi17g0704 745 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 557 721 IPR002213 GO:0008194
Vvi17g0704 745 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 284 - -
Vvi17g0704 745 FunFam UDP-glycosyltransferase 83A1 113 292 - -
Vvi17g0704 745 FunFam UDP-glycosyltransferase 83A1 297 539 - -
Vvi17g0704 745 Gene3D Glycogen Phosphorylase B; 538 724 - -
Vvi17g0704 745 Gene3D Glycogen Phosphorylase B; 112 292 - -
Vvi17g0704 745 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 289 743 - -
Vvi17g0704 745 CDD GT1_Gtf-like 293 725 IPR002213 GO:0008194
Vvi17g0704 745 FunFam UDP-glycosyltransferase 83A1 540 724 - -
Vvi17g0704 745 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 292 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0704 Vvi-Chr17 7777018 7784341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0704 292 744 Glycosyltransferase AT3G02100 43.103 6.75e-128 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0704 - - vvi:100244932 929.087