Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0703 ATGCCGGGTCATTTGAAGGAGTTGATTGAGAAGGTTAACAACTCGAATGATGATGAGAAGATCACTTGTGTTATTGCTGATACAACAGTTGGGTGGGCGCTAGAGGTTGCCGAGAAGATGGGGATCAAGAGCGTTGCGTTTTGCCCCTGTGGACCAGGAAGCTTGGCTTTGTTATTTCACATTCCAAGGCTTATTGAGGCCGGACATGTAAATGGTATTGATGGATCTCTTTTGAACGACGAGTTGATCTCCCTGGCAAAGGATATCCCAGCCTTTAGCAGCAACAAATTGCCCTGGAGCTGCCCAAGTGATCCAAACTTACAAAAGGTCATTTTCCAATTTGCTTTCAAAGACATCTCAGCTATGAATCTTTCCAATTGGCTTCTTTGCAACTCTGTTTACGAACTTGATTCATCTGCTTGTGACTTGATTCCCAACATATTACCAATAGGCCCGTTACTTGCAAGTAATCATCTGGGTCATTATACTGGAAACTTTTGGCCTGAGGATTCAACTTGCATAAGCTGGCTCGATAAGCAACCTGCTGGCTCAGTCATTTATGTTGCCTTTGGAAGCGTAGCAATCTTAAGCCAGAACCAATTCAATGAACTAGCACTGGGTATTGAACTTGTAGGCCGGCCATTTTTATGGGTTGTCCGATCAGACTTCACCAATGGATCAGCTGCTGAATACCCAGATGGTTTCATAGAGAGAGTAGCTGAGCATGGAAAGATTGTTTCATGGGCACCCCAAGAAAAGGTGTTAGCTCACCCTTCTGTTGCATGTTTCTTATCCCATTGTGGATGGAACTCAACCATGGACGGCATAGGCATGGGAGTCCCCTTCCTATGCTGGCCTTACTTTGCAGATCAATTCCATAACCAGAGTTACATATGCGACAAATGGAAGGTGGGCTTGGGGTTGAACCCAGATGAAAATGGATTCATATCAAGGCATGAGATTAAGAAGAAGATCGAAATGTTGGTTTCTGATGATGGTATAAAAGCAAATGCAGAGAAGTTGAAGGAAATGGCTAGAAAAAGTGTGATTGAAGGTGGATCTTCTTACAAGAATTTCCAAACCTTTGTTGAAGCACTGAAACAATGA 1107 0.4345 MPGHLKELIEKVNNSNDDEKITCVIADTTVGWALEVAEKMGIKSVAFCPCGPGSLALLFHIPRLIEAGHVNGIDGSLLNDELISLAKDIPAFSSNKLPWSCPSDPNLQKVIFQFAFKDISAMNLSNWLLCNSVYELDSSACDLIPNILPIGPLLASNHLGHYTGNFWPEDSTCISWLDKQPAGSVIYVAFGSVAILSQNQFNELALGIELVGRPFLWVVRSDFTNGSAAEYPDGFIERVAEHGKIVSWAPQEKVLAHPSVACFLSHCGWNSTMDGIGMGVPFLCWPYFADQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEMLVSDDGIKANAEKLKEMARKSVIEGGSSYKNFQTFVEALKQ* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0703 368 FunFam UDP-glycosyltransferase 83A1 162 347 - -
Vvi17g0703 368 CDD GT1_Gtf-like 7 366 IPR002213 GO:0008194
Vvi17g0703 368 Gene3D Glycogen Phosphorylase B; 161 347 - -
Vvi17g0703 368 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 7 367 - -
Vvi17g0703 368 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 367 - -
Vvi17g0703 368 Gene3D Glycogen Phosphorylase B; 4 359 - -
Vvi17g0703 368 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 6 344 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0703 Vvi-Chr17 7760046 7761340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0703 1 367 Glycosyltransferase AT3G02100 43.280 6.78e-105 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0703 - - vvi:100243281 757.673