Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0702 ATGGGCAGGCGACCTCATGTGCTGATTATACCACTCCCAGCGCAAGGATATGTTGCTCCTCTTATGAGGCTTGCACACCGGATTTCTGATCACGGGATCAAGGTCACCTTTGTTAACTCTGACTTCATACATGCTAAACTGCTGGCTGCACTCCCACATGAGGCTGAGGCTCAGAGTGGGATAGGGCTAGTCTCTATCCCAGATGGTCTGGATCCAGGGGACGATCGGAAAAACTTGCTCAAGATAACAGAAAGTAGTTCAAGAGTCATGCCGGGTCATTTGAAGGATTTAATTGAGAAAGTCAACCGCTCGAATGATGATGAGCAGATCACTTGTGTTATTGCTGACATAACACTTGAGCGGTGGCCAATGGAGGTGGCAGAGAAGATGGGAATCGAAGGGGTCCTTTTTTGTCCTATGGGAGCAGGAATCTGGGCTTTGGCACTTCATATTCCAAAGTTAATTGAGTGGAATCGTAAATAG 483 0.4741 MGRRPHVLIIPLPAQGYVAPLMRLAHRISDHGIKVTFVNSDFIHAKLLAALPHEAEAQSGIGLVSIPDGLDPGDDRKNLLKITESSSRVMPGHLKDLIEKVNRSNDDEQITCVIADITLERWPMEVAEKMGIEGVLFCPMGAGIWALALHIPKLIEWNRK* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0702 160 PANTHER GLYCOSYLTRANSFERASE 5 147 - -
Vvi17g0702 160 Gene3D Glycogen Phosphorylase B; 2 158 - -
Vvi17g0702 160 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0702 Vvi-Chr17 7732840 7733322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0702 4 156 Glycosyltransferase AT3G02100 41.139 6.58e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0702 - - vvi:100248406 306.99