Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0701 ATGGATTCTTCCAAGAGGCTTCCTTGCAACTGTGTTTACGAACTTGACTCATCTGCTTGTGACTTGATTCCTAACTTATTACCAATTGGCCCGTTACCTGCAAGTAGTGATCCGGGTCATTATGCTGCAAACTTTTGGCCTGAGGATTCAACTTGCATAGGCTGGCTCGATAAACAACCTGCTGGCTCAGTCATTTATGTTGCTTTTGGCAGCACCGGAAACTTAACCCAGCACCAATTCAATGAATTAGCACTTGGTATTGAACTTGTAGGCCGACCATTTTTATGGGTTGTCCGATCAGACTTCACCGATGGATCAGCTGCTGAATACCCTGATGGTTTCATTGAGAGAGTAGCTGACCATGGAAAGATTGTCTCGTGGGCACCCCAAGAAGAGGTTTTAGCTCACCCTTCTGTTGCATGCTTCTTTTCCCATTGTGGTTGGAACTCAACCATGGACAGCATAAGCATGGGAGTCCCCTTCCTGTGCTGGCCCTACGTTGTAGATCAATTCCTTGACCAGAATTACATATGCGACAAATGGAAGGTGGGCTTGGGATTGAACCCAGATGAAAATGGACTCATATCGAGGCATGAGATTAAGATGAAGATTGAAAAGTTGGTCTCTGATGATGGCATAAAAGCAAATGCAGAGAAGTTGAAGGAAATGACTAGAAAGAGTGTAAGCGAAGGCGGATCTTCTTACAAGAATTTCAAAACCTTTATTGAAGCAATGAAACACTGA 744 0.4409 MDSSKRLPCNCVYELDSSACDLIPNLLPIGPLPASSDPGHYAANFWPEDSTCIGWLDKQPAGSVIYVAFGSTGNLTQHQFNELALGIELVGRPFLWVVRSDFTDGSAAEYPDGFIERVADHGKIVSWAPQEEVLAHPSVACFFSHCGWNSTMDSISMGVPFLCWPYVVDQFLDQNYICDKWKVGLGLNPDENGLISRHEIKMKIEKLVSDDGIKANAEKLKEMTRKSVSEGGSSYKNFKTFIEAMKH* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0701 247 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 245 - -
Vvi17g0701 247 Gene3D Glycogen Phosphorylase B; 3 238 - -
Vvi17g0701 247 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 16 245 - -
Vvi17g0701 247 FunFam UDP-glycosyltransferase 83A1 41 226 - -
Vvi17g0701 247 CDD GT1_Gtf-like 22 245 IPR002213 GO:0008194
Vvi17g0701 247 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 60 223 IPR002213 GO:0008194
Vvi17g0701 247 Gene3D Glycogen Phosphorylase B; 40 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0701 Vvi-Chr17 7731845 7732588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0701 1 246 Glycosyltransferase AT3G02100 44.400 1.09e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0701 - - vvi:100243316 515.768