Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0700 ATGGGGATCGAGAGCGTTGCGTTTTGCCCCTGTGGACCAGGAACCTTGGCTTTGGTATTTGACATTCCAAGGCTTATTGAGGCCGGACATGTAAATGGTATTGATGGATCTCTTTTGAACGAGGAGTTGATCTGCCTGGCAAAGGATATCCCAGCCTTTAGCAGCAACAGATTGCCCTGGGGCTGCCCAAGTGATCTAACCGTACAAGAGATCCTTTTCCGACTTGCTCTACAATGCATCCCAGCTAAGAATCTTTCCAATTGGCTTCTTTGCAACTCTGTTTACGAACTTGACTCATCTGCTTGTGACTTGATACCCAACATATTACCAATAGGCCCGTTACTTGCAAGTAATCATCTGGGTCATTATACTGGAAACTTTTGGCCTGAGGATTCAACTTGCATAGGCTGGCTCGATAAGCAACCTGCTGGCTCAGTCATTTATGTTGCCTTTGGAAGCCTAGCAATCTTAAGCCAGAACCAATTCAATGAACTAGCACTGGGTATTGAACTTGTAGGCCGGCCATTTTTATGGGTTGTCCGATCAGACTTCACCAATGGATCAGCTGCTGAATACCCAGATGGTTTCATAGAGAGAGTAGCTGAGCATGGAAAGATTGTTTCATGGGCACCCCAAGAAAAGGTGTTAGCTCACCCTTCTGTTGCATGTTTCTTATCCCATTGTGGATGGAACTCAACCATGGACGGCATAGGCATAGGAGTCCCCTTCCTATGCTGGCCTTACTTTGCAGATCAATTCCATAACCAGAGTTACATATGCGACAAATGGAAGGTGGGCTTGGGGTTGAACCCAGATGAAAATGGATTCATATCAAGGCATGAGATTAAGAAGAAGATCGAAATGTTGGTTTCTGATGATGGTATAAAAGCAAATGCAGAGAAGTTGAAGGAAATGGCTAGAAAAAGTGTGATTGAAGGGGGATCTTCTTACAAGAATTTCCAAACCTTTGTTGAAGCACTGAAACAATGA 990 0.4444 MGIESVAFCPCGPGTLALVFDIPRLIEAGHVNGIDGSLLNEELICLAKDIPAFSSNRLPWGCPSDLTVQEILFRLALQCIPAKNLSNWLLCNSVYELDSSACDLIPNILPIGPLLASNHLGHYTGNFWPEDSTCIGWLDKQPAGSVIYVAFGSLAILSQNQFNELALGIELVGRPFLWVVRSDFTNGSAAEYPDGFIERVAEHGKIVSWAPQEKVLAHPSVACFLSHCGWNSTMDGIGIGVPFLCWPYFADQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEMLVSDDGIKANAEKLKEMARKSVIEGGSSYKNFQTFVEALKQ* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0700 329 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 2 328 - -
Vvi17g0700 329 Gene3D Glycogen Phosphorylase B; 53 320 - -
Vvi17g0700 329 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 144 305 IPR002213 GO:0008194
Vvi17g0700 329 CDD GT1_Gtf-like 7 327 IPR002213 GO:0008194
Vvi17g0700 329 FunFam UDP-glycosyltransferase 83A1 123 308 - -
Vvi17g0700 329 Gene3D Glycogen Phosphorylase B; 122 308 - -
Vvi17g0700 329 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0700 Vvi-Chr17 7726000 7727173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0700 2 328 Glycosyltransferase AT3G02100 42.598 2.73e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0700 - - vvi:100265589 680.633