LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi17g0698	ATGAACATGATAAAAGTTTCTAATACAATGGGCATTGAACCAAAGCCATTTGACCCTAAAATGTACGTAGAAGAGGACACATTTGTGACAGATGAATCTGGATCCAAGAAACGCATGCGCTTGGAGAACAACATTGTCCGCTGGAGGAATGTTAAAAATCCAGATGGCACAACATCCTATGAGAGCAATGCGCGTTTTGTGAGATGGTCGGATGGCAGTTTACAGCTATTAATTGGGAATGAAGTTCTTGATATATCAGTGCAAGATGCCCAGCATGACCAATCACACCTTTTTCTTAGACATGGAAAGGGAATTCTCCAATCGCAAGGGAGAATTTTGAGAAAGATGAGATTTATGCCCTCGTCTTTGTCATCGAATTCTCACAGGTTGTTAACAGCTCTTGTTGATTCACGACATAAAAAGGTTTATAAGATTAAGAACTGCATCACAGACATTGATCCTGAGAGGGAAAAGGAGGAAAAAGAAAAGGCTGTGAGTCAAACAATCAGAGCTAATCAACTTCTTAACCGAAAGCGGGAGAAGGTGAATCGAAAGTATACACAAACAGTGGACAGGGGGCGCCAACTGTCCCCTGGATTCTTGGAGGAAGCACTGGATGAGCAGGATGACGAGCCGGATTATCATGATTCTCACCGCCATCGTCGTCGGTTTGAGGATGATCTTGAAATGGATACTCAAGCTGAAAAACGTATTTTTAATGTGAAGAAGGGACATAAAGACATTCCTCACAAATCATCCTTGTCGGCTATTAAATCATCTAGGCGTCCAGTGGATTTCTCTGACAGTGAGAGAGAGGAGTCTGAGTATGAAAGCGATGGGGAGGAAGATGAGAGGTCTTTCTCCCGGAAGAGGGCAGAGGAACCAGAGGAGGAATATGCTGAAGAGGAAGAAGAGGAAGATGAACATGATGAAGAAGAGGCTGAAGCGAATGAAGAATCAGAGGAGGTTGAGGAACCAAAGCAAAAGGGTAAGGAGTATGCCAAGCGCAAGGGAATTGAATCAGATGAGGACTCTCCTCCAAGAAAGAGTGCTAGCCACCGGCGAATGGCATTTGTTTATGATAGTGATGAGGAGTAA	1098	0.4362	MNMIKVSNTMGIEPKPFDPKMYVEEDTFVTDESGSKKRMRLENNIVRWRNVKNPDGTTSYESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQSHLFLRHGKGILQSQGRILRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKIKNCITDIDPEREKEEKEKAVSQTIRANQLLNRKREKVNRKYTQTVDRGRQLSPGFLEEALDEQDDEPDYHDSHRHRRRFEDDLEMDTQAEKRIFNVKKGHKDIPHKSSLSAIKSSRRPVDFSDSEREESEYESDGEEDERSFSRKRAEEPEEEYAEEEEEEDEHDEEEAEANEESEEVEEPKQKGKEYAKRKGIESDEDSPPRKSASHRRMAFVYDSDEE*	366

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi17g0698	365	PANTHER	LEO1 PROTEIN	1	365	IPR007149	GO:0006368\|GO:0016570\|GO:0016593
	Vvi17g0698	365	MobiDBLite	consensus disorder prediction	322	365	-	-
	Vvi17g0698	365	MobiDBLite	consensus disorder prediction	282	296	-	-
	Vvi17g0698	365	Pfam	Leo1-like protein	3	162	IPR007149	GO:0006368\|GO:0016570\|GO:0016593
	Vvi17g0698	365	Coils	Coil	292	322	-	-
	Vvi17g0698	365	MobiDBLite	consensus disorder prediction	205	365	-	-
	Vvi17g0698	365	MobiDBLite	consensus disorder prediction	211	252	-	-
	Vvi17g0698	365	MobiDBLite	consensus disorder prediction	297	321	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi17g0698	Vvi-Chr17	7702062	7708142	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi17g0698	K15177		-	vvi:100260418	648.277