Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0689 ATGAGTAAGGATTATGACTCCGACGATGAAGAGTTTGCAACTGCAGTTGCTGCTGCTGCATTTGCCATCTACACCCTGGAAGAACCTAACTTGCAATATCAGAAAAGAACAAGGGATGGCCTTGAAACCTCTATGTCGAGGCTCAAAAGCAGAAAAGAAGACACCACTGGATTCTTTGGCAAGGAAACACAAACCCCAGGTGAAGCATCCATCAGAAGACAAATGACAAACAATGGGAATTCAATGGAGAACGCTTTTCCATCTAGCAGACCAAGTAAGGCATCTCCGGTAAGATCTGTATCTGCTGCACCCAGAGACCAAAGGCAACAGGGGTATTCAACAAGCAACAGGAGTGTAGAAACCAAAGCAGATGCTTGGGAGAAAGCCCAGATAACAAAGATTAAAAAGCGAAATGATAATATAAGTTCAAGGATTCTTGCTTGGGAGAATGAGAAGAAAATGAGAGCCAAACTTATCATGGAAAGGAAAAAGAGTGAGCTGGAGCAGAGAAAAGCTCTGAATCTTCAACATTACCAAATCAAGATAGAGAGGATTGATCAAATTGCTGGAGGAGCAAGGGCACAGCTACAGGAGAAGAGAAGAAATGAGGAGTCTGAGGTGAAACACAAGGCAGAGATGATCAGAAAGACAGGGAAGGTTCCTGTTAGGTGTTTCTGCTTCTGA 684 0.4342 MSKDYDSDDEEFATAVAAAAFAIYTLEEPNLQYQKRTRDGLETSMSRLKSRKEDTTGFFGKETQTPGEASIRRQMTNNGNSMENAFPSSRPSKASPVRSVSAAPRDQRQQGYSTSNRSVETKADAWEKAQITKIKKRNDNISSRILAWENEKKMRAKLIMERKKSELEQRKALNLQHYQIKIERIDQIAGGARAQLQEKRRNEESEVKHKAEMIRKTGKVPVRCFCF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0689 227 MobiDBLite consensus disorder prediction 35 58 - -
Vvi17g0689 227 PANTHER OS02G0116800 PROTEIN 44 226 - -
Vvi17g0689 227 Coils Coil 150 170 - -
Vvi17g0689 227 MobiDBLite consensus disorder prediction 59 120 - -
Vvi17g0689 227 Pfam Remorin, C-terminal region 118 222 IPR005516 -
Vvi17g0689 227 Coils Coil 193 213 - -
Vvi17g0689 227 MobiDBLite consensus disorder prediction 35 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0689 Vvi-Chr17 7601986 7602915 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0689 - - vvi:104882298 432.95