Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0686 ATGGAGAACAGCGGGGAAGCAGTAGACGATCATGGCTCGGGATGGTTCGAAGTGAAAAAGAAGCATAGAAGTAGCTCAAAGTTCTCCTTACAAAGTTGGGTCGGGGGATTTTCAGGAAAACATTCGTCTACTTTTCTGCATAATCAGTCTTCTTTAAATGGAAAAAATGGAGATTCAAATGGCAAGCGTAGATCCAAATTTCCAAAGGCAGGGGGGAATTTTTCCATGCATAGCCAGGGTAGTGCTGGGAATCCTATTCCTGTATCAAATGAAGATGAAAAAGGTGTAAGTTACCTTGATAAATGTGTAGTTAATCAAGATAGTGGATGTTCCAAATCATCCCAGTCGGGTACCACACTTCCAACAAATTCTAATAGTAGAACTGGTAACGTTCAAGAAGTTCCTCAAAAGGATAAGCCTGATGTGGTTCACAAAATCAAATGGGGTGATCTTGAGGAGGATACTTTTGTACAGAATCAGGAAAGCTCTGTGGGGCCTGAAATTAAGTTTGGTGCTATTTCAGATAATAATCTGCCAGTCTGCAGGAATTCTGAGATTAGTAATGATTTGGTCTCGTGTGTTTCTTCTTGTACTGATCCTCTAGGGAACCACCTGGAGATAATATCTGGGAATGCTGATGTTGTTGCTAACGAGAATTCGTTATCTCTTGGGAATGAATCAATTGAAGGGAAATCTACAAAGGTAAATGAAATATCTTTGAAAGATATGGAAGTATTGGTTGAGGATGGTGGAACAGGACCAAAAAATGATGTTTCATATTGCAAGGAAGTTCACCATGAATGTGTCAAACTGATAAATGATTGCACTTTAAGTTCTAGTTGTCCGACTGGTGGAGATGCTGAGATGACAGTGAAACTTCAGGTACCCATCATTATGTCTCAGGATAGTCATTCAGAAATTTCTGAACTACCAGTTAGAAATGGTGATTCAACCACACTAATGGTTGTCCAAGACTCCATGTCATATCCACCTGAAAATAGTGGACCTGAAGTTTCCGTAGAATCCACTATAACAGACTCTGTTGAAGTCTCTGGGGTTGCACAGGATAGTAAAATACATCATGATGCATCAAAATTGGAGATTATGAGTTCCTCTGGAGAAGGTGATGCAGGGGAAAGCAAAGAAAGGTTTAGGCAGCGGCTTTGGTGTTTTCTATTTGAGAATCTTAATAGGGCTGTGGATGAACTTTATCTTCTTTGTGAACTAGAATGCGATCTGGAGCAGATGAAAGAGGCTATTCTTGTTCTTGAAGAAGCTGCATCTGACTTTAAAGAGCTAAATAGTAGAGTGAAGGAATTTGAGAAGGTGAAAAAATCCTCTTCTCAATTAACCGATTCTACACCAATGACCATGAAAACTGATCACCGCCGGCCTCATGCTCTCTCATGGGAGGTTCGGAGAATGACGACATCTCCACATAGAGCTGAAATACTGTCTTCATCTCTTGAGGCCTTTAAAAAAATTCAACAGGAGAGAGCTAGCATGCGCCAAGTTAATGATCCAAAAATCCCAGGGCCCGAGTTTCCTATTCAATATTGTGAAGATTCAATATTGAAGCCAAGAAAGCAGGGTGGAGTTTCTGATCTCATTCAGGGCAACTTAAATGCAGAGAAGCGGAATGTTGAACCTGTCAAGTCCAGCAAGTTAAACTCTGTGCAAAATGGCCGTGTTTCTTCACAAAACTGTTCCACTTCTGATCCAAATTCATGTAGGTTACCTGTCAAGGATGGTTCTGCTTTTTCTGGAAAAGGAAAGAGAGAACATCTTGGATTCACATCTGAATCAGATAAGCTTCTTCCTAAGAAAGATACAATGTTAACAGAAAGCAACATTGAGAAAAACCCTAAACCCATGGATCATTTGAAGAGACAAATTCCTATTGCTGAAAAGGATAAGGATAAGGAAAAGGAAAAGAGAAATGCACCTTCATGGAAATCCATGGATGCTTGGAAGGAGAAAAGGAACTGGGAGGACATACTTGCATCTCCATTTCGTGTTTCTTCTCGTGTTTCACACTCTCCAGGAATGAGCCGGAGAAGTGTTGAGCGTGCACGCATTTTGCATGATAAATTAATGACTCCTGAGAAAAGAAAGAAAACCGCTTTGGATCTGAAGAAGGAAGCAGAAGAAAAGCATGCACGGGCTATGAGGATTAGAAGTGAGTTGGAAAATGAGAGGGTTCAAAAGCTACAGCGTACATCAGAAAAATTAAATCGCGTTAACGAGTGGCAGGCTGTTCGCAGTATGAAGTTACGAGAGGGAATGTATGCTCGTCATCAGCGTAGTGAGTCTCGGCATGAAGCTTTTCTAGCCCAAGTAGTGAGAAGAGCTGGTGATGAAAGCAGTAAAGTTAATGAGGTTCGTTTCATTACATCCTTAAATGAAGAGAATAAAAAGCTTATGTTGCGTCAGAAACTTCATGATTCAGAGGTGAGGAGAGCTGAAAAACTACAGGTGATAAAAACTAAACAGAAAGAGGACATGGCAAGAGAAGAAGCTGTTTTGGAACGCCGGAAACTCATTGAAGCTGAAAAGTTGCAGCGACTTGCTGAGACACAGAGGAAAAAGGAAGAGGCCCTATTTAGAAGGGAGGAGGAACGCAAAGCATCAAGTGCAGCACGTGAAGCAAAGGCCATTGAACAACTGCGGAGAAGGGAAGTTAGAGCCAAAGCCCAGCAAGAGGAAGCTGAACTCCTGGCCCAGAAATTAGCTGAGAAACTTAGTGAAAGTGAACAACGTCGTAAGTTTTACCTGGAGCAAATACGGGAGAGAGCTTCAATGGATTTCAGGGATCAATCTTCACCTTTACTGCGTCGTTCTTTGAACAAAGACAGTCAGGGTAGATCTACCCCAACCAACAATAATGAAGATTATCAAGCAACCAGCATCTCAGGTTTGGGAAGTGCTACTATTCCAACTGGCAATGTTGGATTGCAACAATCTATGAGACGAAGGATTAAAAGGATCCGGCAAAAGCTTATGGCTCTAAAATATGAATTTCTTGAGCCACCAGTTGGTAATGAAAATGCTGGTATTGGATATAGGACAGCTATGGGAACTGCAAGAGCAAAAATTGGCAGGTGGCTTCAGGAACTCCAGAAACTCAGGCAAGCAAGGAAGGAAGGAGCTGCAAGTATAGGACTGATAACTGCTGAAATGATTAAGTTTTTGGAGGGAAAAGACCCTGAGCTGAATGCTTCTCGCCAAGCTGGTCTGGTTGATTTTATTGCTTCTGCCTTGCCTGCTTCTCACACGTCAAAACCTGAAGCTTGCCAAGTGACAATATATCTTCTGAGACTTTTGAGGGTGGTACTATCTGTGCCTGCAACCAGGAGTTATTTTCTGGCCCAGAATCTCTTGCCCCCGATTATCCCCATGCTGTCAGCTGCTCTTGAGAACTATATTAAGATCGCAGCATCTTTAAACATCCCTGGTAGTACCAGTTTGTCATCAAGCAAAGCATCAGTGGAGAATTTTGAGTCAATATCTGAAGTATTGGATGGGTTCTTATGGACTGTTACTACAATTATTGGTCATATTAGCTCTGATGAACGCCAACTTCAAATGCAGGATGGTTTGCTGGAGCTTGTGATTGCATATCAAGTTATTCACCGGCTACGGGATCTTTTTGCTCTCTATGATAGGCCCCAGGTGGAAGGAGCACCGTTTCCTTCATCTATTCTCTTAAGTATAAATCTATTGACAGTTTTAACATCCAGACCTAGAACCATTTCTTTGATTGATTGGAAATCTTTCCCAGTTGAAACAATTACAGGAAACGAAATTCAAGAAGCTAAACTTACAGAGTCTGCAGATTTTGGACATTCCTATGTAAATAACTCCAGTGGAGATCCCAGACCTCCATTATCCACACTAAATGGTAGCACAATTTTACCTCTACCAGATGTACCAGAGGATAGGCCATTAGATGAACCATGTAAAATAAATAGAAATATTGAGTCAGTATCCATAGGCAAGGATTGTGAGAAGAGGCTGGCTGATATTTCAATTGAGTTGAATAATGTTGATTCAAACATGACAGATGCTTCAGATAGCTCTCAGACAAATTTGAGTGAGGATATTTCCAAGTCTTGTATACCTCAAAAAGGTGAGCAGAATTCAAAGAATATTTGCGCTGAACAAAAGACTGAGAACATATCAAGCTTGAAGCAACCGATGGCATTTCTTCTTTCTGCTATCTCTGATACTGGCCTAGTCAGTCTTCCTTCACTTCTAACAGCTGTGCTGTTGCAAGCAAACAATAGATTGTCTTCAGAACAGGGTTCTTATGTCCTTCCATCAAATTTCGAAGAAGTGGCAACTGGGGTGCTGAAGGTGTTGAACAATTTAGCTTTAATAGATATCACTTTTATGCAGAGAATGCTAGCTAGGCCAGACTTGAAAATGGAATTTTTTCATTTGATGAGTTTCCTTCTTTCCCATTGCACCAGTAAATGGAAAGTAGCTTATGATCAGGTTGGTTTGCTTCTGCTTGAATCTCTGTTGCTTCTTAGCTATTTTTCCTTGTTCCACCCTGGGAACCAAGCTGTCCTGCGATGGGGAAAAAGCCCAACCATTATTCACAAGCGACCCTGA 4617 0.4126 MENSGEAVDDHGSGWFEVKKKHRSSSKFSLQSWVGGFSGKHSSTFLHNQSSLNGKNGDSNGKRRSKFPKAGGNFSMHSQGSAGNPIPVSNEDEKGVSYLDKCVVNQDSGCSKSSQSGTTLPTNSNSRTGNVQEVPQKDKPDVVHKIKWGDLEEDTFVQNQESSVGPEIKFGAISDNNLPVCRNSEISNDLVSCVSSCTDPLGNHLEIISGNADVVANENSLSLGNESIEGKSTKVNEISLKDMEVLVEDGGTGPKNDVSYCKEVHHECVKLINDCTLSSSCPTGGDAEMTVKLQVPIIMSQDSHSEISELPVRNGDSTTLMVVQDSMSYPPENSGPEVSVESTITDSVEVSGVAQDSKIHHDASKLEIMSSSGEGDAGESKERFRQRLWCFLFENLNRAVDELYLLCELECDLEQMKEAILVLEEAASDFKELNSRVKEFEKVKKSSSQLTDSTPMTMKTDHRRPHALSWEVRRMTTSPHRAEILSSSLEAFKKIQQERASMRQVNDPKIPGPEFPIQYCEDSILKPRKQGGVSDLIQGNLNAEKRNVEPVKSSKLNSVQNGRVSSQNCSTSDPNSCRLPVKDGSAFSGKGKREHLGFTSESDKLLPKKDTMLTESNIEKNPKPMDHLKRQIPIAEKDKDKEKEKRNAPSWKSMDAWKEKRNWEDILASPFRVSSRVSHSPGMSRRSVERARILHDKLMTPEKRKKTALDLKKEAEEKHARAMRIRSELENERVQKLQRTSEKLNRVNEWQAVRSMKLREGMYARHQRSESRHEAFLAQVVRRAGDESSKVNEVRFITSLNEENKKLMLRQKLHDSEVRRAEKLQVIKTKQKEDMAREEAVLERRKLIEAEKLQRLAETQRKKEEALFRREEERKASSAAREAKAIEQLRRREVRAKAQQEEAELLAQKLAEKLSESEQRRKFYLEQIRERASMDFRDQSSPLLRRSLNKDSQGRSTPTNNNEDYQATSISGLGSATIPTGNVGLQQSMRRRIKRIRQKLMALKYEFLEPPVGNENAGIGYRTAMGTARAKIGRWLQELQKLRQARKEGAASIGLITAEMIKFLEGKDPELNASRQAGLVDFIASALPASHTSKPEACQVTIYLLRLLRVVLSVPATRSYFLAQNLLPPIIPMLSAALENYIKIAASLNIPGSTSLSSSKASVENFESISEVLDGFLWTVTTIIGHISSDERQLQMQDGLLELVIAYQVIHRLRDLFALYDRPQVEGAPFPSSILLSINLLTVLTSRPRTISLIDWKSFPVETITGNEIQEAKLTESADFGHSYVNNSSGDPRPPLSTLNGSTILPLPDVPEDRPLDEPCKINRNIESVSIGKDCEKRLADISIELNNVDSNMTDASDSSQTNLSEDISKSCIPQKGEQNSKNICAEQKTENISSLKQPMAFLLSAISDTGLVSLPSLLTAVLLQANNRLSSEQGSYVLPSNFEEVATGVLKVLNNLALIDITFMQRMLARPDLKMEFFHLMSFLLSHCTSKWKVAYDQVGLLLLESLLLLSYFSLFHPGNQAVLRWGKSPTIIHKRP* 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0686 1538 Coils Coil 856 927 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 551 594 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 552 578 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 1 32 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 936 983 - -
Vvi17g0686 1538 Coils Coil 625 645 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 44 91 - -
Vvi17g0686 1538 PANTHER S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM 115 1536 - -
Vvi17g0686 1538 Coils Coil 712 732 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 940 983 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 1283 1304 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 108 133 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 1 24 - -
Vvi17g0686 1538 Coils Coil 413 443 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 861 883 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 108 137 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 1283 1312 - -
Vvi17g0686 1538 Pfam S phase cyclin A-associated protein in the endoplasmic reticulum 379 480 IPR032446 -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 44 58 - -
Vvi17g0686 1538 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0686 Vvi-Chr17 7542594 7554891 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0686 K24869 - vvi:100262175 2934.44