Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0677 ATGACAGAGTATAGCATTGATATCCCAGTGGCTGCAGAGAAACTTGAGCTTGACTTCCCAGCAACCTTGGAGAAAATTGATCTTGATATCTCAGTGTTGCCAGAGAAAAAGGAGCTTGAAGGTGGCAATGTAAGAGGGAACTCTGCTGGAAAAACAGGTGGAGCAAATGGCAGAGCTAAGGTTCTTCCCAATTATCTCAGTTCTCCAACTGGCTCCTGCCATGATTTCTGCAAGTATGGAACAAAACCCGTCTTTGGAAAAAAGGCAGAAAGGGTCAGAGCAACATCAGGTGAAGGTGAAGATTTGAAGCAAACTGCAACTGTTAAAGAGCAAAGGAAGAAATCAGCAACCAGTCTTAAGCCTTCTCCTGATCCCAAAACACAGCTTCCTGACCATCCCTCAATCATCAAGAGAGATGTTCGGCCACTGGTTAAAAATGCAGTTGTCTCTTCAGAACAGCTTTCATCACCTGGCAAAGATGCAGATGTTTTGTTGAATCACGATAGTGATTTGAAGCTCAAGGCTGTCAAAACAAAGCCATCTCTTCTTCCAATGCCGAGATTTTTGAGCAGTAAAAGAAACAGTGACACTAGAGTAACCAAGGAAATTGGGATTCTACCATCATCTCCACTTGGAGATCGAAGGAGTAGAAGCAACAGTGGAATTGGATCTCCACTTGGAGGTCCAAGGAGTGGAAGAACCACTGGATTTGGATTAGGCAAAGATAGAGCAACCTCCATAATGAGCAAGAAAAAGGTTTCATCTGCACCAGCTGTCAAGAGAGTTGCAAGCAAAAAGGCTAGAACCAATACAAATGTTGAAGGGGTCTCTCCTGTGAAGAATCAAAGCAATGCTAGAAAAACTGAATTTGAGCGTCCCAGAAATGAGAATGTCCCTGAGAAGATATTGCATGTGATTGAACCTAAGGCTGCAAACAAAACTGTGGGAACCACTCGAAATAGTCTCCACACCACCAAATCATCTTCATCCTTAGAGGGCAAAAGTTTGACACTTGCTAAAAAGGGAACTCGTGTCACTCATTTGGCTTCATCTCCTGAGAAGAAAAATCAGAGACAAGCTCAAACTGGAGTTCATACTTCTCGTTCGCCTCCTTCGATCTCTCCACCCTCCATGAACAAAAGCTTACAACATACTCAAAATGGAATTCATACCAAACAATCATCTGTGTCTTCATTAGCATCAACATCATCACCCACACCTCCATCTGAATCTGTGCAGAGTGAAGACAGTGGCACCATCTCTGAACACTCTGCAACTGAAATTGAGAACCATTCAAAAGTAGAATACAAGAAAATGCCTAGAAGAGTTGGAAAAATTGGCTCAGGAGATAAAGATGACTCACCACGCAAGCTGAATTCCAGGAGAGGACTTCAATATGAGAACAATAGTCCAAGGAGACTCAGATTGAAGAAAGGAAGAGGTCTATGTGAGGCAGATTTCAGAAAAAGAAGCTTTAAGAGAACAGAAGTTGTTCATATTGATTTTGCTGATGCTAAAACCGAATTTGAGAAAGTTGTGCTGAGGCACCAAGATGTGGAAAGCAACAAAGACACCCAGACCTCCCTTAACAACAAGAATGAAGAAGTTGTATTGAAACACCAAGATGTTGAGGACAAAAAAGACAACCAGAATTTTCTTAATAATGTGATTGAAGAAGTTGTGCTCAGACACCATGATGTTGAAGACAAAAAGGAAAACCAGAGTTTGCTTAATCGCACGATTGAAGAGACTGCAAGTAAGCTCGTTGAGACCAGGAAGAGTAAGGTCAAGGCTTTGGTGAGTGCTTTTGAATCCTTGATCTCCCACCAAGATACGGCACACATGGCAACAACTAGAGCACACTGA 1866 0.4234 MTEYSIDIPVAAEKLELDFPATLEKIDLDISVLPEKKELEGGNVRGNSAGKTGGANGRAKVLPNYLSSPTGSCHDFCKYGTKPVFGKKAERVRATSGEGEDLKQTATVKEQRKKSATSLKPSPDPKTQLPDHPSIIKRDVRPLVKNAVVSSEQLSSPGKDADVLLNHDSDLKLKAVKTKPSLLPMPRFLSSKRNSDTRVTKEIGILPSSPLGDRRSRSNSGIGSPLGGPRSGRTTGFGLGKDRATSIMSKKKVSSAPAVKRVASKKARTNTNVEGVSPVKNQSNARKTEFERPRNENVPEKILHVIEPKAANKTVGTTRNSLHTTKSSSSLEGKSLTLAKKGTRVTHLASSPEKKNQRQAQTGVHTSRSPPSISPPSMNKSLQHTQNGIHTKQSSVSSLASTSSPTPPSESVQSEDSGTISEHSATEIENHSKVEYKKMPRRVGKIGSGDKDDSPRKLNSRRGLQYENNSPRRLRLKKGRGLCEADFRKRSFKRTEVVHIDFADAKTEFEKVVLRHQDVESNKDTQTSLNNKNEEVVLKHQDVEDKKDNQNFLNNVIEEVVLRHHDVEDKKENQSLLNRTIEETASKLVETRKSKVKALVSAFESLISHQDTAHMATTRAH* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0677 621 MobiDBLite consensus disorder prediction 426 460 - -
Vvi17g0677 621 MobiDBLite consensus disorder prediction 90 119 - -
Vvi17g0677 621 PANTHER EMB|CAB62594.1 558 612 - -
Vvi17g0677 621 SMART CaM_binding_2 505 608 IPR012417 GO:0005516
Vvi17g0677 621 MobiDBLite consensus disorder prediction 90 134 - -
Vvi17g0677 621 Pfam Plant calmodulin-binding domain 466 531 IPR012417 GO:0005516
Vvi17g0677 621 Pfam Plant calmodulin-binding domain 528 561 IPR012417 GO:0005516
Vvi17g0677 621 Pfam Plant calmodulin-binding domain 558 608 IPR012417 GO:0005516
Vvi17g0677 621 MobiDBLite consensus disorder prediction 285 307 - -
Vvi17g0677 621 MobiDBLite consensus disorder prediction 205 473 - -
Vvi17g0677 621 MobiDBLite consensus disorder prediction 349 425 - -
Vvi17g0677 621 MobiDBLite consensus disorder prediction 313 336 - -
Vvi17g0677 621 MobiDBLite consensus disorder prediction 265 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0677 Vvi-Chr17 7433358 7435223 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0677 - - vvi:104882300 1174.84