Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0675 ATGGTTTCAGAGAGGAACCAATCTAAGCACGTATGCGTGATCGGGGCGGGGCCATCGGGGCTGGTGGCGGCCAGGGAGCTAAGAAAAGAGGGCCACAGTGTGGTGGTGATAGAGCAAAACCATGATATTGGAGGGCAGTGGCTGTATGAACCCAAAGTGGAGGGTGAGGAGGCTTTAGGGAAGAGTACATTTTTAAAGGTCCATAGCAGCATCTATGACTCTCTGAGGCTGTTTTCTCCTAGAGAAATCATGGGGTTCAGTGATTTTCCATTTGTTGTAAAGAAAGGTAGGGACATGAGGAGATTTCCAGGGCACAGGGAGCTTCTCTTGTACCTGCAAGACTTTTGTGAATGGTTTGGGCTCAGGGAGATGATAAGGTTCAAAACTAGAGTAGAGTATGTGGGGATGTTGGATTCTGATCAAGTTGGCAGAGATTTGAAGTGGGTTGTGAAAAGCAGGGACATGGAGTCTGAAAAGGTGGTGGAGGAGGTGTTTGACGCAGTGGTTGTGGCAACGGGCCACTACTCCAAGCCTAGGTTGCCTTCCATTAAAGGAATGGATGTCTGGAAAAGGAACCAAATGCATAGCCACATCTACAGGGATCCTGAGCCATTCCGCAAAGAGGTGGTGGTGGTTGTTGGAAATTCATTGAGTGGACAAGACATCTCTATGGAACTTGTGGATGTGGCCAAAGAAATCCATTTAAGTGCCAAATCTCTTGAAATTTCGGAGGGTCTAGCTAAAGTCATTTCCAAACACGACAGCTTGCACCTGCATCTAGAGATTGAATCCCTTCATGAAGATGGACGAGTGGTATTTGTAGATGGGTCTTGGGTCATGGCAGACACCATCATATACTGCACCGGGTATTCATATGCCTTCCCATTTCTTGACACCAAAGGAATAGTAGGAGTGGATGATGACAGAGTAGGCCCATTGTATGAGCACACCTTCCCTCCATCCCTCGCACCCTCTCTATCTTTTGTGGGCATTCCCAGAAAGCTCATAGGGTTCCCTTTCTTTGAATCACAAGCAATATGGATAGCTCAGCTACTGTCTGGGAAAAGAACATTACCATCATTCCATGACATGATGCAATCCATTAAAGACTTCTATCACTCCAGAGAGATTGCTGGCGTCCCAAAACACAATACTCACGATCTTGCCAATTTTGAGTACTGTGATAAATATGGAGATAATGTTGGGTTCCCGCACTTGGAAGAATGGAGGAAAGAGCTATGCATATCGGCCATAGTAAAGGCCGAGGTGGACTTGGAGGGTTACAGGGATGCTTGGGACGACGTCGAGCTGCTGCAAGTGGCTCTTCAAAGCCCTCATTTCACTCAATTCCCTCGATCTACTTGA 1365 0.4703 MVSERNQSKHVCVIGAGPSGLVAARELRKEGHSVVVIEQNHDIGGQWLYEPKVEGEEALGKSTFLKVHSSIYDSLRLFSPREIMGFSDFPFVVKKGRDMRRFPGHRELLLYLQDFCEWFGLREMIRFKTRVEYVGMLDSDQVGRDLKWVVKSRDMESEKVVEEVFDAVVVATGHYSKPRLPSIKGMDVWKRNQMHSHIYRDPEPFRKEVVVVVGNSLSGQDISMELVDVAKEIHLSAKSLEISEGLAKVISKHDSLHLHLEIESLHEDGRVVFVDGSWVMADTIIYCTGYSYAFPFLDTKGIVGVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLIGFPFFESQAIWIAQLLSGKRTLPSFHDMMQSIKDFYHSREIAGVPKHNTHDLANFEYCDKYGDNVGFPHLEEWRKELCISAIVKAEVDLEGYRDAWDDVELLQVALQSPHFTQFPRST* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0675 454 Gene3D - 11 431 IPR036188 -
Vvi17g0675 454 SUPERFAMILY FAD/NAD(P)-binding domain 7 234 IPR036188 -
Vvi17g0675 454 PIRSF FMO 7 241 IPR000960 GO:0050660|GO:0050661
Vvi17g0675 454 PIRSF FMO 253 403 IPR000960 GO:0050660|GO:0050661
Vvi17g0675 454 PRINTS Flavin-containing monooxygenase (FMO) signature 274 301 IPR000960 GO:0050660|GO:0050661
Vvi17g0675 454 PRINTS Flavin-containing monooxygenase (FMO) signature 33 57 IPR000960 GO:0050660|GO:0050661
Vvi17g0675 454 PRINTS Flavin-containing monooxygenase (FMO) signature 9 25 IPR000960 GO:0050660|GO:0050661
Vvi17g0675 454 PRINTS Flavin-containing monooxygenase (FMO) signature 339 352 IPR000960 GO:0050660|GO:0050661
Vvi17g0675 454 PRINTS Flavin-containing monooxygenase (FMO) signature 221 236 IPR000960 GO:0050660|GO:0050661
Vvi17g0675 454 FunFam Flavin-containing monooxygenase 182 287 - -
Vvi17g0675 454 Gene3D - 182 287 IPR036188 -
Vvi17g0675 454 Pfam Flavin-binding monooxygenase-like 9 239 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi17g0675 454 Pfam Flavin-binding monooxygenase-like 261 378 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi17g0675 454 PANTHER DIMETHYLANILINE MONOOXYGENASE 9 449 - -
Vvi17g0675 454 SUPERFAMILY FAD/NAD(P)-binding domain 242 413 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0675 Vvi-Chr17 7414904 7417040 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0675 - - vvi:100253651 910.983