Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0672 ATGCATTTGAATTTTATCTTGGCCATCCAGGTGCAGGAACTCCATCGTCTTTATAGAAGACAGATGGAATTAATGAACGAAATTGAAAAGAAGCAACTCCATAAGCAGTCTGACTATGCCGTGAAGATGTCACAAGAGCCAAGGGATCTTGATTCAATTTCAACGAGACCAAACAGTTTAATTGACTTGAATCAACCTTATCAGGGGGAAGAAGCTGGAACTTCAACCTCTGTTTATTCTCTTGATCCTGGGATCAACCAGGGAGAGATCCCAGGCAGGGATCCATCTGCAAAAACAAATTCAGGATTTGGAGTTTCATCCATGGAAAGTTTTGGTAATAGTGAAACTAAAAAAAACGTGGATGCATGCTCAAGGCCGCAGGAGCATCCACCTTTTACCAATGAAGCTGGGCATAATAGAAGCACATTGGTCGATTTTCAGTTCCCATCAGTTTCAACTCGGGGGAGGCCAAGACATCATTTGGAGCGGAGTCCAATAGTGGTTTTAGCACTTCCTGCCTTTAATGGCCCTGCCCCATTGAATAAGTTCTCCAGACGATCAATTGCTAGGCCTAGGCATACTGGCAACAAGCTTCATGTGGGTAGAAGTTCGAGATGTAGTCCACAACATGGACATGTGAGGTCCAAGATCACTTCCCATGACTCCCATTTCGAGTCCATGACAAGCAGTACTGACCATGATTTCTCTCCTGGACACCCTGCCCATAAGGAGCACTTGAAGGGTTCAGATATAATGGATGTGAAATCAGAGAGGGATATGGACTTAAATTCCATTCCCCCCGCCCGTTCTGCAGATGTGGTTTCCCAACAACAGATTTGTACCATGGATAAAGGCGACAAGTCTGAAGAGAGTTGGCCAGCACTTTCTGTTCCAGGAGCTTCTGTAGTGGCACCTATTAGTCCAGAAAACCAGGAGTGTCCTCGACCTAGAGGAGAATCTGAGGAGACTCCTCTAGATTTGTCCCAAGGGAAAGGTACAGGTCCACTAGAGAAGCCTGACAAAATTGCAGCAGAGGAATCACTTTTCACTTCTTCAACTGGGATTGAAGCTTGTTTAGAGAGTGCTGCTTGTGATCCATCCAACACTTCACCCCTGTATTGGTTTGTCACTATTTGTTTGGATCCTGACACTGAGTCTAAATTAGCTTTTAGTGGCAATAATGGTGCTGAACAGGAAGGGTTGTCATGTGATGAGGTTGATTACTTTGAAGCCATGACATTGAAACTAGTTGAGCTTAAGTCAGAAGAGCACCTGTGCAAGAACAATAGCCAAAAGGAGGAAGGGACATGCTCTACCATATTTCTGAGTCAACCAAAAAAGGGCCGCCGGTGGAGACGACAGAAGGACTTTCAAAAGGAAATCCTCCCCAGCCTCGCCTCTCTCGCGAGGCATGAGGTGGCTGAAGATCTTCAGACAATAGGAGGGCTGGTGAAAGCTGCAGGTTCTCCTCCAGGAACAAAGTTGGCAAGAGATGCTGGTAAAAACAAGGAGGCAAGGGGGAGGAAGCGGATGAGAGCCTCCGTCTCCAATGTGGTGGAGAGCACTGGGTCTATGCCATTGCAACAGCCAGCTGCCACTGCTGAACCGGGGTCACAGGACAGATGGCTAACAGGGTGGGGGAGTGTAAGGCGCCGGGGTCAGAGACATCGGACAAGTAATCCTTCTCTTCTTTTAACTCAGTTCTCATGA 1710 0.4684 MHLNFILAIQVQELHRLYRRQMELMNEIEKKQLHKQSDYAVKMSQEPRDLDSISTRPNSLIDLNQPYQGEEAGTSTSVYSLDPGINQGEIPGRDPSAKTNSGFGVSSMESFGNSETKKNVDACSRPQEHPPFTNEAGHNRSTLVDFQFPSVSTRGRPRHHLERSPIVVLALPAFNGPAPLNKFSRRSIARPRHTGNKLHVGRSSRCSPQHGHVRSKITSHDSHFESMTSSTDHDFSPGHPAHKEHLKGSDIMDVKSERDMDLNSIPPARSADVVSQQQICTMDKGDKSEESWPALSVPGASVVAPISPENQECPRPRGESEETPLDLSQGKGTGPLEKPDKIAAEESLFTSSTGIEACLESAACDPSNTSPLYWFVTICLDPDTESKLAFSGNNGAEQEGLSCDEVDYFEAMTLKLVELKSEEHLCKNNSQKEEGTCSTIFLSQPKKGRRWRRQKDFQKEILPSLASLARHEVAEDLQTIGGLVKAAGSPPGTKLARDAGKNKEARGRKRMRASVSNVVESTGSMPLQQPAATAEPGSQDRWLTGWGSVRRRGQRHRTSNPSLLLTQFS* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0672 569 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 10 559 - -
Vvi17g0672 569 Pfam Plant protein of unknown function (DUF863) 304 557 IPR008581 -
Vvi17g0672 569 Coils Coil 11 31 - -
Vvi17g0672 569 MobiDBLite consensus disorder prediction 304 338 - -
Vvi17g0672 569 MobiDBLite consensus disorder prediction 484 569 - -
Vvi17g0672 569 MobiDBLite consensus disorder prediction 515 535 - -
Vvi17g0672 569 MobiDBLite consensus disorder prediction 191 249 - -
Vvi17g0672 569 MobiDBLite consensus disorder prediction 497 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0672 Vvi-Chr17 7340062 7342035 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0672 - - vvi:100853516 1136.32