Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0670 ATGGAGAGTTCCGATGAGTTTTCTAGAAAAACTAAGGATGTTTCCCTTCAAGAACTTAGGGATAGGCTTGCAGAGTTTGCTAGAGTAAGGGGATGGGAGCAATATCACAGTCCTAGAAATCTCCTTCTAGCTCTAGTGGGAGAGGTTGGAGAGCTCTCTGAGATATTCCAGTGGAAGGGAGAAGTCGCAAGAGGACTGCCCAATTGGACCGCAGCCGATAAGACGCATTTAGAAGAGGAGCTGTCTGATGTTTTACTCTATCTAGTTCAACTTGCTGATGTTTGTGGACTCGATCTTGGCCAAGCAGCTCTATCAAAGATAATCAAGAATGCTCAGAAATACCCGGTTGTTAATCAGACAATTTCAACCACCTTCAACTAG 381 0.4436 MESSDEFSRKTKDVSLQELRDRLAEFARVRGWEQYHSPRNLLLALVGEVGELSEIFQWKGEVARGLPNWTAADKTHLEEELSDVLLYLVQLADVCGLDLGQAALSKIIKNAQKYPVVNQTISTTFN* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0670 126 Pfam MazG-like family 48 119 IPR025984 GO:0009143|GO:0047429
Vvi17g0670 126 PANTHER - 5 120 - -
Vvi17g0670 126 SUPERFAMILY all-alpha NTP pyrophosphatases 14 116 - -
Vvi17g0670 126 CDD NTP-PPase_RS21-C6_like 20 110 IPR025984 GO:0009143|GO:0047429
Vvi17g0670 126 PIRSF UCP029826_pph 6 124 IPR025984 GO:0009143|GO:0047429
Vvi17g0670 126 Gene3D - 4 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0670 Vvi-Chr17 7322936 7323444 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0670 K16904 - vvi:100241572 246.128