Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0659 ATGGAGGTCTCAAACCGTGAATTTACTGTAAAATTGGATAGTTTTGATATTCCTTTCGTTGTGTGCTATTTCCTTCACCAGCCAGAGTTGGAGAAAGAACAAGAGCTTGAAGGCCTGCTAAAGGACTTAGCCAACTGCAAGGTGCAACTGGAGGCAAAGGACTCTGCCCACATGCAAGCCCTTCTTAAGCTGGATCACCATCGAAAAACAGCAGACGAGCTTTCCACCTTGCTGAAGAGCTCCGAGGTTGAGAGAGATAAATACATAAATGAATGCATAGAATCTAGAACTCGGATAGATGAACTTGAAACCAAGACGAAGCAGATGGCTGATCAATTGTTGGAAACTGCAAAGGTTCGAGAGCAGCTTTCACATGTTTTAAGCAAGTTGAAAAGTGCACAAGAAGAGTTACTTCGTGTGGAAACAGAACTTGCTGATGCTAGAGAATCTGAATTCAAGGCTATGACACAAGCAGAGCTGATGCAAACTGCTGTCAACATGGAAAGAGGCAAGACAGCTGAGCTTCTAAAGCATGTATCAGAGCTCAATGAAGCTATTCTTCATTCAAAGCTGGCTGCTATTGAAGCAGAGAAAGAGAACTCTGCAGTTCTATCTGAGAAAGAGGCAGAGTTACAGTTAGTGACAGCAACTTTGGCTCAAGCACAGAAACAACTAGAAGAGTTGAGGAAACAAACAGAGATAGTGCAGTTTCTGGAAAATGAGCTCCTGGCTAAATCGGTATTTATTGAAACCCTGCAATTTGAACTTAAAGAATCCAATGAACTTCACAGTTTATCTGCAAAAGCTGCTTCTGAAGCTATTAACAATTTAAACCAGCTAAAATCAGATTTTGAAAGGCAGGAAAGAGAGAACTCAGAACAAGCAGTATCCATTAACTCACTGGAAATGGAGCTTAATCAGTTGAAAATAAAGCTTAAGAATGCAAATGAGGAGGTAGGCTGTTCAAAGTGTGATGTTGAGATGCTTAGAGGGGAATTAGAGAAGACAAAAATTGAGGTGGATGAGATTAGAGGAAGGGAGAATGAAGCTCAAGTTGAAATAGCACTTCTGAAATCTGAGCTTCACAAAGGGAGGTCAAGAATTGCAGCAGCAGAGGCAGCTGAAGCAAGGGCTGAGAGTGTTAAGTCCGGGCTATATCTTGCAGTCCAGCAACTAGCAGTAGAAGCAGGAGAAGCCAAGAAGGAGAGCCAAAGGCTAAAACAAGGAGCGGATGAAGCAAAAGAAATAACTAGAGAGACTGTCTCTGTCAACCCCCAATTTGAAGTCTCTTCTCAAGATTTAGAACTTTCCCAAAAAGATGAATACAATAAAGAAGCTAAAGCAAGAAAAGATGACCACATCACAATTTCAGTGATTGAATATGAATCATTGGTTAGCAAGGCTAAGAAGGCGGATCAAATTCCAGTATTGGTATCTGAAAATTTAAGTCAATCGGCCACATTTGAAAATAGGGATGAGGCAGAAGTTCTGAAGGAGTTGGAATTTGCAATGGTGAGAATTGCTGAGTTTAGGACTCGGGCAGAGCAGGCAGTGAGCAGGGCTGAGATGGCTGAGAAAGCTAAGGCAGCAATTGAGGAACAACTAAGGCAGTGGCGAGAGCAGAGGCAAAGGAAAAGAGCTGCTTTAGCAGCGCTCCATGAAGAGTCTGTCCGAAAAGAGAACAATATTCTTAAATTTGAGCAGACTCCTACAACATATCAGCCACTGGGTTATAATATATTCATCCTCCCAATCAGAAGGACAATGGTAGTTCTTGAGGATCTAAGATGCATGTGTATGCTATGCTATGTTTTGTCCCTAAAAATCAGTCCAACAATACGCAACCTTGGAGGATAG 1857 0.419 MEVSNREFTVKLDSFDIPFVVCYFLHQPELEKEQELEGLLKDLANCKVQLEAKDSAHMQALLKLDHHRKTADELSTLLKSSEVERDKYINECIESRTRIDELETKTKQMADQLLETAKVREQLSHVLSKLKSAQEELLRVETELADARESEFKAMTQAELMQTAVNMERGKTAELLKHVSELNEAILHSKLAAIEAEKENSAVLSEKEAELQLVTATLAQAQKQLEELRKQTEIVQFLENELLAKSVFIETLQFELKESNELHSLSAKAASEAINNLNQLKSDFERQERENSEQAVSINSLEMELNQLKIKLKNANEEVGCSKCDVEMLRGELEKTKIEVDEIRGRENEAQVEIALLKSELHKGRSRIAAAEAAEARAESVKSGLYLAVQQLAVEAGEAKKESQRLKQGADEAKEITRETVSVNPQFEVSSQDLELSQKDEYNKEAKARKDDHITISVIEYESLVSKAKKADQIPVLVSENLSQSATFENRDEAEVLKELEFAMVRIAEFRTRAEQAVSRAEMAEKAKAAIEEQLRQWREQRQRKRAALAALHEESVRKENNILKFEQTPTTYQPLGYNIFILPIRRTMVVLEDLRCMCMLCYVLSLKISPTIRNLGG* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0659 618 Coils Coil 267 290 - -
Vvi17g0659 618 Pfam Weak chloroplast movement under blue light 33 419 IPR008545 -
Vvi17g0659 618 Coils Coil 298 360 - -
Vvi17g0659 618 Coils Coil 204 241 - -
Vvi17g0659 618 Coils Coil 399 419 - -
Vvi17g0659 618 Coils Coil 71 105 - -
Vvi17g0659 618 Coils Coil 123 150 - -
Vvi17g0659 618 Coils Coil 507 555 - -
Vvi17g0659 618 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 32 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0659 Vvi-Chr17 7239747 7242719 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0659 - - vvi:104882303 996.112