Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0658 ATGGAGAAAGCTCTGACGAAGGTGGGGAGCTTTTGGATTTCCAAGAAAGCCAAGGAGGAGATCTCCAACATTACTGAAGACCTGTCTACTTTCTCAAACACTGTTGAAGAGAAGGCAAGATGGGTATTCAACAAGCTAAAAGGTAAGCCAGCAAAAGCCTTGCCGGATCTCCTCCGAGAGCACAACCTTCCGCCAGGCCTCTTCCCCAGGAACATAACATGTTACGAATTTGATGAGTCAAGGTCCAAGCTGATCGTGTATTTGCCCTCTGCCTGCGAGGTCAGCTTCAAGGACTCGTCCATCATAAGATATGCCACTCGCGTCAAAGGAACATTGGCAAGGGGAAAGCTCACTGGAATAGAAGGAATGAAGACGAAGGTCCTAGTCTGGGTTAAAGTCACTGTTGTGAGTGTGGAGACCTACAAGTCTGATAAAGTGTGGTTCACAGCCGGTGTGAAGAAATCAAGACCCAAAGATGCTTATGAAATGACCCGCGATGCTGTTAAAATAGAAGAGTTTTGA 522 0.4674 MEKALTKVGSFWISKKAKEEISNITEDLSTFSNTVEEKARWVFNKLKGKPAKALPDLLREHNLPPGLFPRNITCYEFDESRSKLIVYLPSACEVSFKDSSIIRYATRVKGTLARGKLTGIEGMKTKVLVWVKVTVVSVETYKSDKVWFTAGVKKSRPKDAYEMTRDAVKIEEF* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0658 173 Pfam Protein of unknown function, DUF538 56 162 IPR007493 -
Vvi17g0658 173 Gene3D - 32 173 IPR036758 -
Vvi17g0658 173 SUPERFAMILY At5g01610-like 4 172 IPR036758 -
Vvi17g0658 173 PANTHER T31J12.3 PROTEIN-RELATED 44 164 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0658 Vvi-Chr17 7231683 7234824 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0658 - - vvi:100852956 325.479