Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0656 ATGAGTTCGTCGTCGCCACATCGTTCTCGTGACAAAGAGGAAAGACCGAGGTTCTTCGACCCCAAAGCCAAGAGTCTGTGCTGGGCTAAAGCCGATGCAGTGCCAGGTCGTCACCCTGATCGATGGCGCAAAGATGCCGCCGGCAACATCGTCTGCAAGCGCTTCTGCAACTGCCAAGGCTGTCTCTGCTTTGAGTACGATCACATCATTCCTTTCTCCAAAGGTGGTGAGTCCGTACCGGAGAATTGTCAGATCCTTCAAACAAGAGTAAACAGGTTTAAATCAGACAAAGACAATGTGGACAAAACTCAGTTGCAAGGTTACTCTTGCGATGTCAAGTTCACTGATAAGGAGCTCGACATAATTGAAATGGCTGTTTATGGGGATGTGATTCGCCCAGGAAACCAGTGCCGTTGTAGAACTGTTGCTGAGATGCTTGGGCAATACAAGCCCAAAGATCGCATGGCAGCTTGCAAGTTGCCATTTAATGACGAGTCTCTATAA 504 0.4861 MSSSSPHRSRDKEERPRFFDPKAKSLCWAKADAVPGRHPDRWRKDAAGNIVCKRFCNCQGCLCFEYDHIIPFSKGGESVPENCQILQTRVNRFKSDKDNVDKTQLQGYSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVAEMLGQYKPKDRMAACKLPFNDESL* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0656 167 Gene3D - 30 116 - -
Vvi17g0656 167 PANTHER HNH ENDONUCLEASE 6 141 - -
Vvi17g0656 167 Pfam HNH endonuclease 52 86 IPR002711 GO:0003676|GO:0004519|GO:0008270
Vvi17g0656 167 CDD HNHc 53 92 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0656 Vvi-Chr17 7224017 7226800 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0656 - - vvi:100852985 359.762