Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0648 ATGGGTCTAGATAATTTTACAACTCAGAAGAGAACTGGAGCTGGAATCCCCACCACCAACGGCAGACCGGCCGGCGGCCGGCTTTCCGGCTTACCACGTGGCCGCCAGATTCACAAGACCTTCAACAACATCAAGATCACAATTCTCTGCGGATTCGTCACCATTCTCGTCCTCCGCGGCACCATAGGCGTGGGCAACCTCGGCGGCTCTGGAGGTGAAGTCGAGAATCAAAACCTAATTGAAGAGACAAATCGCATTTTGGCTGAGATCCGATCCGACGGCGATCCCACCGATCCCGATGACCCTGCGGAGTCTGAGATCAATCCCAACGTCACCTACACTCTCGGCCCCAAAATTACGAATTGGAATGAGGAACGGAAGGTATGGCTTGATCGGAACCCTGAATTCCCAAATTTTGTGAATGGTAAAGCTCGAATCTTGCTCGTAACTGGTTCACCACCGAATCCGTGTGATAACCCAATTGGGGATCACTATTTGCTGAAATCAATCAAGAACAAGATTGATTATTGCAGGATTCATGGAATTGAGATAGTGTACAATATGGCTCATCTTGATAAGGAACTAGCTGGTTATTGGGCAAAATTGCCGTTGATTCGGCGGTTAATGTTATCACATCCCGAAGTGGAGTGGATTTGGTGGATGGACAGTGATGCGTTGTTTACAGATATGGTTTTTGAGATACCTCTGTCCAAGTATGATAATTATAATTTGGTTGTACATGGGTACCCTGATTTGATGTTTAATCAGAAATCTTGGATTGCTTTGAATACGGGTAGTTTTTTGTTTCGGAACTGTCAGTGGTCATTGGATTTGCTTGATGCCTGGGCGCCAATGGGACCAAAGGGTCCGATAAGAGATGAGGCAGGGAAGATTTTGACAGCGAATTTGAAGGGGAGGCCGGCATTTGAGGCAGATGATCAGTCTGCATTGATATACTTGTTGATTTCAAAGAAGGATGAGTGGATGGATAAGGTGTTTCTTGAGAACTCTTATTATTTACACGGGTATTGGGCTGGATTGGTAGATCGCTACGAAGAGATGATTGAAAAGTACCATCCAGGATTAGGTGATGAGAGGTGGCCATTTGTGACCCATTTTGTGGGTTGCAAGCCTTGTGGAAGCTATGGGGATTACCCTGTTGAGAGGTGTCTGCGCAGCATGGAGAGGGCCTTCAATTTTGCAGACAATCAGGTGCTTAAGCTGTATGGGTTTAGGCATAGGGGCTTGTTGAGCCCTAAGATCAAGAGGATCAGGAACGAGACAGCTACTCCATTGGAGTTCGTAGATCAGTTTGATATACGGCGTCCAGAGCATGGGGGACACAGCCTATGA 1353 0.4686 MGLDNFTTQKRTGAGIPTTNGRPAGGRLSGLPRGRQIHKTFNNIKITILCGFVTILVLRGTIGVGNLGGSGGEVENQNLIEETNRILAEIRSDGDPTDPDDPAESEINPNVTYTLGPKITNWNEERKVWLDRNPEFPNFVNGKARILLVTGSPPNPCDNPIGDHYLLKSIKNKIDYCRIHGIEIVYNMAHLDKELAGYWAKLPLIRRLMLSHPEVEWIWWMDSDALFTDMVFEIPLSKYDNYNLVVHGYPDLMFNQKSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTANLKGRPAFEADDQSALIYLLISKKDEWMDKVFLENSYYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLRSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETATPLEFVDQFDIRRPEHGGHSL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0648 450 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 142 289 IPR029044 -
Vvi17g0648 450 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 29 437 IPR008630 GO:0016020|GO:0016757
Vvi17g0648 450 FunFam xyloglucan 6-xylosyltransferase 2 142 293 - -
Vvi17g0648 450 Pfam galactosyl transferase GMA12/MNN10 family 143 381 IPR008630 GO:0016020|GO:0016757
Vvi17g0648 450 MobiDBLite consensus disorder prediction 1 32 - -
Vvi17g0648 450 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0648 Vvi-Chr17 7124403 7125755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0648 4 442 Glycosyltransferase AT5G07720 79.596 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0648 K08238 - vvi:100263916 937.562