Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0626 ATGGCTTGTTCATTGAAGACTGGTCTGTGCATTTCTGGGATGATGGAGGCTTCTTTCAGGCCCAAAAGCAAAGGGGTTCACGAGTCATGTGCCTCCTTTGGGTCTTTAAAGTTCAAAGAATCTCTTGTTCTGGGTAGCAGATTTACGGGAAAGCATGTGTTTATCACGGATCAGAAATGTTTAAGAGATTGGAGTTTTAAAGCCCCATACAAATTCTCTGTTCATGCACAAGCATCAATCTGCGTGAGCCGAGCTCTGAGATGGTGGGAGAAGACTCTTAAAACCAACATGGTAGAGATCCATTCTGCACAAGAGCTCGTCGATTCCTTACTGAATGCAGGGGATAGATTGGTGGTTGTTGACTTCTATTCGCCTCGTTGTGGAGGCTGCAAAGCTCTGCATCCCAAGATCTGTCAGCTGGCTGAATTGAACCCAAATGCAATTTTTCTCAAAGTTGATTATGAAGAACTCAAAACTATGTGTCACGCTCTCCACATCCATGTCCTACCATTCTTTAGGTTCTACAGAGGTGCAGAGGGCAGGGTTTGCAGCTTTAGCTGCACCAATGCAACTATCAAGAAATTCAAGGATGCATTGGCAAAGCACGGCGCCAATCGATGTAGTCTCGGCCCTGCAAAAGGCCTAGATGAATCTGAGCTGCTGAAGTTGGCAGCAGTTGGTGAGATACCTCTGAATTTACCATTACCATCTTCCAAGGGTGAAGTAATGGAGGATTCGGCCCTGAAAGGCGCTCATATGTCTGGTTTCTGGGGCAAAGCAGGTAGCAATATGGAACTTGAAGAAGAGAGTGCGATATTGAAGGTCTGA 828 0.4577 MACSLKTGLCISGMMEASFRPKSKGVHESCASFGSLKFKESLVLGSRFTGKHVFITDQKCLRDWSFKAPYKFSVHAQASICVSRALRWWEKTLKTNMVEIHSAQELVDSLLNAGDRLVVVDFYSPRCGGCKALHPKICQLAELNPNAIFLKVDYEELKTMCHALHIHVLPFFRFYRGAEGRVCSFSCTNATIKKFKDALAKHGANRCSLGPAKGLDESELLKLAAVGEIPLNLPLPSSKGEVMEDSALKGAHMSGFWGKAGSNMELEEESAILKV* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0626 275 SUPERFAMILY Thioredoxin-like 88 204 IPR036249 -
Vvi17g0626 275 CDD TRX_family 113 200 - -
Vvi17g0626 275 PANTHER THIOREDOXIN, MITOCHONDRIAL 71 225 - -
Vvi17g0626 275 Gene3D Glutaredoxin 88 205 - -
Vvi17g0626 275 FunFam Thioredoxin-like 1-2, chloroplastic 86 204 - -
Vvi17g0626 275 ProSiteProfiles Thioredoxin domain profile. 86 204 IPR013766 -
Vvi17g0626 275 Pfam Thioredoxin 107 181 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0626 Vvi-Chr17 6915202 6916346 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0626 - - vvi:100263807 562.762