Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0622 ATGACTATAAGTCAGACCAGAAATGTTGGTCTTCCATTGATGAAACTTGTGAGATGGAAAGGAGTACCCATATTGCAGCAACTGCATTTGGAAGAGCAGCTGCTTCGAACCTCATCCGAGAATTGGTGCATCATAAATGATGGGGCAAATGATCCTACTATTGTCATGGGCATTTCAGGGAAACCTGCCCAACTTCTTAAACTGGACTCAGTGTTAAATGATCGGATTCCTGTCATCAGAAGGTATACTGGGGGAGGTACTGTTGTCGTTGATTGTGGAACAGTTTTTGTCACTTTTATATGCAATAAGGATGCTGTTCCTGGCTTACAACCATATCCTCAACCAATCATGTCTTGGAGCAGCCTACTGTATGCTCTAGTGTTTAGAGGATTTGGTGATTTCAGTCTTCGTGAGAATGATTATGCATTTGGTAACCATAAATTTGGTGGGAATGCACAATCCATCACAAAAAACCGGTGGATCCACCACACATCTTTTTTGTGGGACTATGAGGCCAGGAACATGGCTTACCTGAAACTTCCAGCAAGGGCTCCTGAATATCGAGTGGCAAGGGACCACTTGGAATTCATTTGCCGCATGAAGGACTATATGCCAAGGTCGGTTTTTGTTGATAGAACCATTAAGGCGGTTGAAACCCATTTTTCAGTGAGACCCGTAGAATTGGAGGCAATGGAGACTAACTTGAATTCAAAATTTCCTCACTCCACCAAGCTACTGACGGAGCAGGAATTGGAGGCAGCAGCATTTGAATCTCATTTCGAGAAAGCTCTCTCCCATTCACTATAA 807 0.4337 MTISQTRNVGLPLMKLVRWKGVPILQQLHLEEQLLRTSSENWCIINDGANDPTIVMGISGKPAQLLKLDSVLNDRIPVIRRYTGGGTVVVDCGTVFVTFICNKDAVPGLQPYPQPIMSWSSLLYALVFRGFGDFSLRENDYAFGNHKFGGNAQSITKNRWIHHTSFLWDYEARNMAYLKLPARAPEYRVARDHLEFICRMKDYMPRSVFVDRTIKAVETHFSVRPVELEAMETNLNSKFPHSTKLLTEQELEAAAFESHFEKALSHSL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0622 268 PANTHER BIOTIN/LIPOATE A/B PROTEIN LIGASE FAMILY 1 259 - -
Vvi17g0622 268 CDD LplA 14 221 - -
Vvi17g0622 268 SUPERFAMILY Class II aaRS and biotin synthetases 13 233 IPR045864 -
Vvi17g0622 268 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 39 225 IPR004143 GO:0036211
Vvi17g0622 268 Gene3D Bira Bifunctional Protein; Domain 2 14 258 IPR045864 -
Vvi17g0622 268 FunFam Putative lipoate-protein ligase A 12 253 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0622 - - vvi:100245023 528.094