Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0620 ATGAGGCCAATCAAGGAGCGAAGACGAAGCCGGTCATCTCCAGCAAGGGACCGACCCATTGGGCCATCTGGGTTCGAGCCAAGGCCATCTGGGTCTCGCTCAACTACTAGGCTTTCACCCTCCTCCACCTCTCTTCTTGACACCCCCTTTATCACTGAAGACGAAGATGCCACTCTCTTCGACAACCTCAAAATCTCCCCAAACCCTAACTTCAACCCTAGAAGTTTCCCATATAGTGTGAAGCAACAGTGCTGGGAAAAGGCGGAGAAAATCAAAGGTCGAGACCCGGACCGATGGCGCCGAGACCCCCTCGGCAACATCGTGTTTCGGAAGCTTGTTGGTTGCCCTGGTTGTCTCTGTCATGATTATGATCACATTGTTCCTTACTCCAAGGGGGGCAAGAGCACATTGGAAAATTGTCAGGTTTTACAGGCAACAGTTAATCGATCAAAAGGGAATCGGACTGAGATTTCTAAGGCTGATCTCATTCAGAAAAGTTCTTATTGCCGTGTTTCAGGCCGTGACATGGACCTTCTTGAACTCTCAGCATATGGCAATGTCCGCCGTGGACAAGACTCTGGTGGATGTACAATTCAATGA 600 0.4983 MRPIKERRRSRSSPARDRPIGPSGFEPRPSGSRSTTRLSPSSTSLLDTPFITEDEDATLFDNLKISPNPNFNPRSFPYSVKQQCWEKAEKIKGRDPDRWRRDPLGNIVFRKLVGCPGCLCHDYDHIVPYSKGGKSTLENCQVLQATVNRSKGNRTEISKADLIQKSSYCRVSGRDMDLLELSAYGNVRRGQDSGGCTIQ* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0620 199 MobiDBLite consensus disorder prediction 1 47 - -
Vvi17g0620 199 Gene3D - 80 173 - -
Vvi17g0620 199 PANTHER HNH ENDONUCLEASE 11 199 - -
Vvi17g0620 199 CDD HNHc 107 152 IPR003615 -
Vvi17g0620 199 SMART HNH_5 103 149 IPR003615 -
Vvi17g0620 199 Pfam HNH endonuclease 121 154 IPR002711 GO:0003676|GO:0004519|GO:0008270
Vvi17g0620 199 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0620 Vvi-Chr17 6854363 6859691 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0620 - - vvi:100262165 370.163