Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0593 ATGGAAAATTCAGGGCAATGGCTGGAGAAGGCGTTGATAGAACTGTGCAAAGGAATGGAAACGGGTCTAGACTTAGACGAAGACATCATCTCAGGACTTGTCTCTTACTGCGAGCTCGCTCCTCCCCTTGACGCCCAAGAATACCTCCATAATATCATTGGTCAGGAAGCTGGCCAAAGTGTAATTGAGGAATATTTACGACGAAGAGGTCACAAGGATTCCCATAGCAGCACCCCAGATGTTCCAACTTCCAAATTACACGCCTATGTTAAACCACCGTCGAATGAAGGTTCCTTTGGAGGAGCCAAGAAACCATTGAGAACACAGAAACAGGTTATGGTCCCTGTTAATCAGGAAAAACAGGCTCCAACCGATACCAGCAATTCAAGAAACACACACGTAGCAAACCAAGGTGGCTCTAGAAAGAAAAAAGCTGGCAAAGTTGTTTCACTTGCAGAGGCTGCAAAAGGGTCTATTGTATTCAAGCAAGGAAAACCATGTACATGCCAAGCCCGTCAGCACACACTGGTGAGCAATTGTTTATCTTGTGGCAAGATAGTTTGCGAACAAGAGGGAGAGGGGCCATGCAGTTTTTGTGGTGCCCTTGTGCTAAGAGAAGGAAGCACATATGCCGGTCTGGATGAAAGCATTGTTCCCCTAACAGATGCTGAAGCAGCAGCTGAAGCTTACGCAAAGAGACTTGTTGAGTATGACCGGGATTCTGCAGCACGTACAACAGTTATAGATGACCAAAGTGACTACTACGAAATTGAGGGGAACAGTTGGCTGTCAGTGGAGGAGAAGGAACTATTAAGGAAGAAAAAGCAGGAGATTGAAGCAGCTGAGCAAGCCAAACGGAATAAAGTGATTGTGACTTTTGACTTGGTTGGCCGCAAGGTGATGGTGAATCAAGATGAAGTTTCAGAATTAGAATCAGAGAACAGAATACTAAGGCCACCAGATGAAAGAGAAATAAACCGGATTAAACCAAACCCAACTCTCAAGGTACAACCAATCTTTATGGACCCAGGACCAAATAGGAAGCCTGCTAAAGGGAAACAACTAAACAAGAGCCTAGGGAATGGTATGCGCTTGGAGATAACTGGAAGGGTGCAACATGACAGCAATGAATTAAAACAATTTATGCCAGATAATCAGCTGGAAACATCTTCAAATGGCAAGCTTTGGCAGAGGCCTTCAGTAAATGGAGGTTTGCGTGTGGAAGATGATGATGCATGTTCCCTGGATTACCGTTAA 1257 0.4487 MENSGQWLEKALIELCKGMETGLDLDEDIISGLVSYCELAPPLDAQEYLHNIIGQEAGQSVIEEYLRRRGHKDSHSSTPDVPTSKLHAYVKPPSNEGSFGGAKKPLRTQKQVMVPVNQEKQAPTDTSNSRNTHVANQGGSRKKKAGKVVSLAEAAKGSIVFKQGKPCTCQARQHTLVSNCLSCGKIVCEQEGEGPCSFCGALVLREGSTYAGLDESIVPLTDAEAAAEAYAKRLVEYDRDSAARTTVIDDQSDYYEIEGNSWLSVEEKELLRKKKQEIEAAEQAKRNKVIVTFDLVGRKVMVNQDEVSELESENRILRPPDEREINRIKPNPTLKVQPIFMDPGPNRKPAKGKQLNKSLGNGMRLEITGRVQHDSNELKQFMPDNQLETSSNGKLWQRPSVNGGLRVEDDDACSLDYR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0593 418 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 6 393 IPR039128 -
Vvi17g0593 418 MobiDBLite consensus disorder prediction 119 146 - -
Vvi17g0593 418 MobiDBLite consensus disorder prediction 383 418 - -
Vvi17g0593 418 Coils Coil 264 288 - -
Vvi17g0593 418 Coils Coil 220 240 - -
Vvi17g0593 418 MobiDBLite consensus disorder prediction 383 398 - -
Vvi17g0593 418 MobiDBLite consensus disorder prediction 68 105 - -
Vvi17g0593 418 MobiDBLite consensus disorder prediction 119 138 - -
Vvi17g0593 418 MobiDBLite consensus disorder prediction 334 360 - -
Vvi17g0593 418 Pfam Putative zinc finger motif, C2HC5-type 165 205 IPR009349 GO:0005634|GO:0006355|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0593 K23398 - vvi:100262075 832.017