Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0592 ATGGCGAAAAAAGGAAATGCAGCAGAAAGTAAAACTAGGAGCTCTATTTCCATCTTTGTTGTATTGGGTCTGTGTTGTTTCTTCTATATTTTGGGTGCATGGCAACGAAGTGGTTTTGGGAAGGGAGACAGCATAGCCATTGAAGTCACCAAACAAACGGACTGCAGTATCCTCTCCAATTTGAATTTTGAGACTCATCATAAAGATGAAGCAGGGACAATTGGCGACCAGTTCAAGCCATGTGATGCTCAGTACATTGATTACACACCATGCCAAGATCAAGACAGAGCAATGACGTTCCCCCGAGAAGATATGAACTATAGAGAAAGACATTGTCCTCCAGAGGGAGAGAAACTTCATTGCCTTATCCCTGCACCCAAAGGATACGCTACACCATTCCCATGGCCAAAGAGCCGTGATTATGTACCCTTTGCAAATGCACCATATAAGAACTTGACTGTTGAGAAGGCTGTTCAGAACTGGATTCAATATGAGGGCAACGTGTTTAGGTTCCCAGGTGGTGGAACACAGTTTCCTCGTGGAGCAGATGCATATATTGATGAACTTGCTTCTGTGATACCATTTGAAAATGGGATGGTTAGAACAGCATTGGACACTGGTTGTGGGGTTGCAAGTTGGGGTGCATACTTGTTTAAAAAGAATGTTATAGCCATGTCATTTGCACCAAGAGACTCACATGTAGCTCAAGTTCAATTTGCTTTGGAGAGAGGTGTGCCAGCAGTTATTGGTGTTCTTGGAACTATAAAGCTACCATATCCATCTGGAGCCTTCGACATGGCTCACTGTTCTCGTTGCTTGATTCCATGGGGTGCAAATGATGGAATGTACATGATGGAAGTTGATCGAGTTCTTAGACCAGGTGGTTACTGGGTTCTTTCTGGCCCTCCCATCAGCTGGAATATTAATTACCGAGCATGGCAGCGCCCTAAAGAGGATCTCCAGGAGGAACAGAGCAAGATTGAAGAGATTGCCAAACTTCTTTGCTGGGAAAAGAAGTATGAGAAGGGTGAAATAGCTATCTGGAGGAAAAGAATAAATCATGATAGTTGCAGTGAGCAAGATTCACACGTTACCTTTTGTGAAGCTACAAATGCAAACGATGTCTGGTACAAGCAGATGGAGGCCTGCGTAACTCCTTATCCTAAGACTACAGAAGCAGATGAAGTTGCTGGTGGTGTATGGAAGCCATTTCCTGAGAGACTGAATGCCGTTCCCTTCAGGATATCCAGTGGATCCATCCCTGGAGTCTCTGATGAGACTTTCCAGGAGGATGACAAATTGTGGAAGAAGCATGTCAAAGCTTATAAAAGAACCAATAAGATCATTGACTCAGGAAGGTATCGCAACATCATGGATATGAATGCTGGTCTGGGCAGTTTTGCTGCAGCACTTGAATCACCCAAATTGTGGGTGATGAATGTTATGCCTACAATAGCTGAAAAAGACACTCTGGGTGTCATTTATGAACGAGGATTGATCGGCATATACCATGATTGGTGTGAAGCTTTCTCAACTTACCCAAGGACATATGACCTAATTCATGCAAATGGTGTTTTCAGCTTGTACAAGAACAGTTGTAGTGCGGAAGACATTCTTCTGGAGATGGATCGCATCCTACGGCCTGAAGGAGCAGTCATATTCCGTGATCAAATAGACGTGCTCATCAAGGTGAAAAAGATCGTAGGAGGAATGAGGTGGAACACTAAATTAGTGGATCATGAAGATGGCCCCCTTGTCTCTGAAAAGATATTGTTTGCTGTCAAACAGTACTGGGTTGTAGGTGAAAACAACTCCACAGCAGCTCCACAGTGA 1833 0.4386 MAKKGNAAESKTRSSISIFVVLGLCCFFYILGAWQRSGFGKGDSIAIEVTKQTDCSILSNLNFETHHKDEAGTIGDQFKPCDAQYIDYTPCQDQDRAMTFPREDMNYRERHCPPEGEKLHCLIPAPKGYATPFPWPKSRDYVPFANAPYKNLTVEKAVQNWIQYEGNVFRFPGGGTQFPRGADAYIDELASVIPFENGMVRTALDTGCGVASWGAYLFKKNVIAMSFAPRDSHVAQVQFALERGVPAVIGVLGTIKLPYPSGAFDMAHCSRCLIPWGANDGMYMMEVDRVLRPGGYWVLSGPPISWNINYRAWQRPKEDLQEEQSKIEEIAKLLCWEKKYEKGEIAIWRKRINHDSCSEQDSHVTFCEATNANDVWYKQMEACVTPYPKTTEADEVAGGVWKPFPERLNAVPFRISSGSIPGVSDETFQEDDKLWKKHVKAYKRTNKIIDSGRYRNIMDMNAGLGSFAAALESPKLWVMNVMPTIAEKDTLGVIYERGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKNSCSAEDILLEMDRILRPEGAVIFRDQIDVLIKVKKIVGGMRWNTKLVDHEDGPLVSEKILFAVKQYWVVGENNSTAAPQ* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0592 610 FunFam probable methyltransferase PMT2 155 353 - -
Vvi17g0592 610 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 442 557 IPR029063 -
Vvi17g0592 610 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 22 598 IPR004159 GO:0008168
Vvi17g0592 610 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 322 IPR029063 -
Vvi17g0592 610 Gene3D Vaccinia Virus protein VP39 153 350 IPR029063 -
Vvi17g0592 610 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 87 595 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0592 Vvi-Chr17 6617392 6621506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0592 - - vvi:100267238 1278.85