Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0591 ATGGATAATGCAGCCAACAGTCTCCATCTTCGGGACGCCTCATTTTCTGCTTACCTCAGCACGGCAGAGGAGAACTTTGCAGTCAAGCTTGCTGAGTCGATTCAGAGCCCCTATCTGCCCCTTACTTCAACGCAAGAGGCTGCCTATCCAGTAAACTTAGGAAGAACCATGTCTGTGGAGGAGGGTGAGCTTAGGGTCTTTGGCGCTGAGAAATACTTCAACATGAAAATGGATGATGGGAGGCGAAGGCTTACCACCAGTAGTTCATTGACGCACAGGCAAATAAAAGAAGACCGAGCTGATCTGCACTGTACTAAACCAAAAATCAGGCCAGGAACTCCGAGTGCAAGCTCTGAAGCAAGTTGGAACAGCCACGCTGCATTATTGCCAAGGCTCCTGAGAAACCCATCTCCCAGTAAGCAAAGGAAGGCAAATGCAAAGATGATTTTTGCTGGTTTTGGTTGCAATGGATCTTGTTCTGATAAGAAATCCGTCTATGTTGATACAAATGCTGAGCCTGGAGGGGCTTTCCCAACCAGGGTTTCCATAGACAAGAGAGCAGAAGAGGAGGGGCGAAAGTCCCTAGAGGTGTTTGGCTCCCATATGCTGAAAAAGGGAGATGTTGCAACCAACCTAGAGAGGAAACTCTCTGTGCTCACTTGGGATGCCATTCCAAAAGTCCAGACCGTTCCAACAACTTCTGAAGGCACGGGAATATATGAAGACAATGAGAGTGATGCTAGTTCTGATCTGTTTGAGATAGAGAACCTGTCCGGCAGTGCCCACCCATTGTTCAATAGGCAAGCCTCAGATGGCATGTCCAGCTGTACCCGGTATGAGCCAAGCGAGGCCAGCATTGAGTGGAGTGTGGTCACAGCCAGTGCAGCTGATTTCTCAGTGACTTCAGATTTTGACGAGAAGAAACAGGTGGAGAGTACTGAAAATTCAAGGGAAATGAATTTTGCAAGTACACCCACTAGACCAAGCAAAACCAAATCCTCAGTGGGCAAGGAAGCACAACGAAGCCGTCCCACTGGACTGTTGGGATGTAGGAGTGACAAAGCGGTGAGAGTTTCTGAGCCAGCATATCGAACAAATGACAAGGTAAAGTCTGACCCGGGATGGCATCATAGGTTGGATTCCTCCATGCCACTAGGGAAGTCCCAAGGCGAGAATAAGGTGAAAGATTTCGAAGTGTTTCACTTACTAATTTCTCCTTGCAATGTATCCCAATAG 1236 0.4798 MDNAANSLHLRDASFSAYLSTAEENFAVKLAESIQSPYLPLTSTQEAAYPVNLGRTMSVEEGELRVFGAEKYFNMKMDDGRRRLTTSSSLTHRQIKEDRADLHCTKPKIRPGTPSASSEASWNSHAALLPRLLRNPSPSKQRKANAKMIFAGFGCNGSCSDKKSVYVDTNAEPGGAFPTRVSIDKRAEEEGRKSLEVFGSHMLKKGDVATNLERKLSVLTWDAIPKVQTVPTTSEGTGIYEDNESDASSDLFEIENLSGSAHPLFNRQASDGMSSCTRYEPSEASIEWSVVTASAADFSVTSDFDEKKQVESTENSREMNFASTPTRPSKTKSSVGKEAQRSRPTGLLGCRSDKAVRVSEPAYRTNDKVKSDPGWHHRLDSSMPLGKSQGENKVKDFEVFHLLISPCNVSQ* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0591 411 MobiDBLite consensus disorder prediction 357 377 - -
Vvi17g0591 411 MobiDBLite consensus disorder prediction 303 389 - -
Vvi17g0591 411 MobiDBLite consensus disorder prediction 315 340 - -
Vvi17g0591 411 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 185 374 IPR039615 GO:0009638
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0591 Vvi-Chr17 6613320 6614938 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0591 - - vvi:104882316 428.713