Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0590 ATGGTGGCAGACAAAGGCAAGAAATTGAAGCAGTCGGAGAAAGAAGAAGAAGTGAACTCAGACCACATTGATGGGGACCTCGTTCTCTCCATCGAGAAGTTGCAGGAGATCCAAGATGACCTTGAGAAAATCAATGAGGAAGCAAGTGATAAAGTTTTGGAAGTAGAGCAGAAGTACAACGAGATAAGGAAGCCCATCTATGACAAGCGAAATGATATCATCAAATCCATTCCGGACTTCTGGTTAACTGCTTTTTTGAGTCATCCTGCTCTTGGTGACCTTTTGAGTGAAGAAGACCAAAAGATCTTCAAATATCTAAGTTCTTTGGAAGTGGAGGACTTCAAAGATGTGAAGTCGGGTTATTCTATTACATTTAACTTCAATCCCAATCCATTTTTTGAAGATACCAAGCTGAAAAAGACTTTTACCTTCCTTGATGAAGGCATTACCAAAATTTCTGTTACATCAATCAAGTGGAAGGACGGCATGGGCATTCCCAATGGGGTTAATCATGAGAAGAAAGGAAACAAAAGGCCCATTGCTGATGCAAGTTTCTTTAGCTGGTTCAGTGAAACCCAACAGAAAGATATCATGGACGATATTCATGATGAGATTGCAGAGATAATCAAGGAGGACTTATGGCCCAACCCTCTCACTTATTTCAATAGTGAAGCTGATGAGGAAGACTTTGATGGCGAAGATGCCGATGAAGAGGGAAAAGGAGGTGATGGTTCTGAAGAGGACGATGATGATCAAGAGGATGACGATGAGGATGATGATGATGATGAGGGCGATGAGGACGACTGA 807 0.4176 MVADKGKKLKQSEKEEEVNSDHIDGDLVLSIEKLQEIQDDLEKINEEASDKVLEVEQKYNEIRKPIYDKRNDIIKSIPDFWLTAFLSHPALGDLLSEEDQKIFKYLSSLEVEDFKDVKSGYSITFNFNPNPFFEDTKLKKTFTFLDEGITKISVTSIKWKDGMGIPNGVNHEKKGNKRPIADASFFSWFSETQQKDIMDDIHDEIAEIIKEDLWPNPLTYFNSEADEEDFDGEDADEEGKGGDGSEEDDDDQEDDDEDDDDDEGDEDD* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0590 268 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 14 251 IPR002164 GO:0005634|GO:0006334
Vvi17g0590 268 MobiDBLite consensus disorder prediction 1 21 - -
Vvi17g0590 268 Gene3D - 1 77 - -
Vvi17g0590 268 Gene3D Nucleosome assembly protein 78 225 - -
Vvi17g0590 268 MobiDBLite consensus disorder prediction 219 268 - -
Vvi17g0590 268 Coils Coil 27 58 - -
Vvi17g0590 268 SUPERFAMILY NAP-like 10 221 IPR037231 -
Vvi17g0590 268 Pfam Nucleosome assembly protein (NAP) 31 75 IPR002164 GO:0005634|GO:0006334
Vvi17g0590 268 Pfam Nucleosome assembly protein (NAP) 75 222 IPR002164 GO:0005634|GO:0006334
Vvi17g0590 268 MobiDBLite consensus disorder prediction 224 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0590 Vvi-Chr17 6601619 6607324 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0590 K11290 - vvi:100244926 457.218