Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0574 ATGGCTAAGATTCGTGAGTTGTGTTGCTTTCTCTTACTGGCATTTGCGATTGCTAAGGTTTCTGAGGCAAGTAGTGAAATCGGGGTGTATGAATTGAAGAGGGGAAATTTCTCTGTCAAGCTCACCAACTATGGCGCCACTGTTGTCTCTGTTATTCTCCCTGATAGGAATGGAAAATTGGACGACGTCGTTCTTGGATTTGACTCCGTTGAAGACTATAAGAACGATACAACCTACTTCGGCGCTATTGTGGGACGTGTGGCGAACCGAATTAAAGGGGCTCAGTTTACTCTGAATGGCAAAAAATACAAGTTGGTTCCCAATGAGGGAAAGAACATGCTCCATGGTGGCCCCAAAGGATTCAGTGATGTGATATGGCATGTTCAAAGCTATGACAAAAACAGTCACGTTACATTCGTATATCACAGCTTTGATGGTGAAGAAGGATTTCCTGGTGATCTTCATGTCTCAGTGACATATATGTTCTTCCAAACGAACAAGTTAGTCATAAAAATGACAGGTAGACCTCTTAACAAGGCCACCCCAGTGAATCTGGCCTCCCATAGTTACTGGAACCTTGGGGGCCACAGCAGCGGCGACGTCTTCTCACACCAGGTTCAGCTGTTTGCAGACAAGATCACTCCAGTTGATGATGAGCTCATTCCCACCGGCAAAATTCTCCCTGTGGAGGGAACTCCGTATGATTTTCTCAACATCCATGAAATTAAAACTAGGTTCCATGAATTACCTAGTGGTTATGATATCAATTATGTGCTTAACTATGTGGGGAATGAGCACTTCCATAAGGCCGCCGTGGTGTATGAAAGCAAATCGGGGAGGAAGATGGAGCTGTGGACTAATCAGCCTGGCCTGCAGTTTTATACCAGCAACATGCTGGGGACTGTGAAGGGAAAAGGTGGTGTTACTTATAACAATTATGATGGAATATGCTTGGAGACACAAGGGTTTCCAGACGCCGTGAATCATCCAGACTTCCCATCACAGATCGTAAATCCTGGGGAGATTTATGAACATTTTATGGTTTACAGGTTCACAGCCAAGTAG 1065 0.4469 MAKIRELCCFLLLAFAIAKVSEASSEIGVYELKRGNFSVKLTNYGATVVSVILPDRNGKLDDVVLGFDSVEDYKNDTTYFGAIVGRVANRIKGAQFTLNGKKYKLVPNEGKNMLHGGPKGFSDVIWHVQSYDKNSHVTFVYHSFDGEEGFPGDLHVSVTYMFFQTNKLVIKMTGRPLNKATPVNLASHSYWNLGGHSSGDVFSHQVQLFADKITPVDDELIPTGKILPVEGTPYDFLNIHEIKTRFHELPSGYDINYVLNYVGNEHFHKAAVVYESKSGRKMELWTNQPGLQFYTSNMLGTVKGKGGVTYNNYDGICLETQGFPDAVNHPDFPSQIVNPGEIYEHFMVYRFTAK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0574 354 CDD galactose_mutarotase_like 30 351 IPR047215 GO:0016853
Vvi17g0574 354 PIRSF GALM 16 354 IPR015443 GO:0016853|GO:0019318
Vvi17g0574 354 Gene3D - 16 353 IPR014718 GO:0030246
Vvi17g0574 354 Pfam Aldose 1-epimerase 29 350 IPR008183 GO:0005975|GO:0016853
Vvi17g0574 354 PANTHER ALDOSE-1-EPIMERASE 25 352 - -
Vvi17g0574 354 FunFam Aldose 1-epimerase 17 353 - -
Vvi17g0574 354 SUPERFAMILY Galactose mutarotase-like 24 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0574 Vvi-Chr17 6410783 6413303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0574 11 353 Miscellaneous Gene Families AT3G47800 63.557 2.02e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0574 K01785 - vvi:100256955 723.776