Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0565 ATGACGATTGAGCTGGCGAGGCAGAAGAGAAGAAAGGGGTCTATGAACAGCAGAAGCCGGAAACTAATGCTGAGTCCAGTTCAGCATCTGTATGAGACCTGCAGCGAAGTGTTTGCTGATGGAAAGGCTGGCTTTGTTCCGCCCCCGAAGGATATCGAGCGGCTGAGATCAGTTCTGGATAACCTGAAACCGGAGAATGTCGGCCTGTCAGCAGACATGCCATATTTCAGGGCAACTGGATCCGACGAAGTTCCTCCTCCAGTGACGTACCTACATATCTATGAATGTGATAAATTCTCGATTGGGATCTTCTGCTTGCCGCCATCTGGTGTTATTCCCCTTCATAATCATCCAGGCATGACTGTTTTCAGTAAGCTCCTCTTTGGGTCGATGCACATCAAATCATATGATTGGGTGGCCGATGTTTCGTACAGCAAGAACCAGAATACACACCATGAGGACTTGGCAGCACTCCAGCATGAACCCCGGTTAGCCAAGGTTCATGCTGACTCTGATCTGACTGCACCTTGCAAAACCTCAGTTCTCTATCCAAATGCAGGAGGCAATATGCACTGCTTCACAGCATTGACTCCATGTGCCATGTTAGATGTGCTGGGTCCACCCTACTCCGATGATGAAGGCCGCCACTGTACATACTACAATGATTTTCCTTATGCCACATTTTCAGGAGATACGGGATCATTACAAGCAGAGGAGATGGAAGGATGTGGGTGGCTTAAAGAAATGGAGAAACCCGAGAGCTTTGTCGTGGTTGGAGCAATGTATAGAGGCCCACAGTTTGTGGAGAATTGA 813 0.4846 MTIELARQKRRKGSMNSRSRKLMLSPVQHLYETCSEVFADGKAGFVPPPKDIERLRSVLDNLKPENVGLSADMPYFRATGSDEVPPPVTYLHIYECDKFSIGIFCLPPSGVIPLHNHPGMTVFSKLLFGSMHIKSYDWVADVSYSKNQNTHHEDLAALQHEPRLAKVHADSDLTAPCKTSVLYPNAGGNMHCFTALTPCAMLDVLGPPYSDDEGRHCTYYNDFPYATFSGDTGSLQAEEMEGCGWLKEMEKPESFVVVGAMYRGPQFVEN* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0565 270 PANTHER UNCHARACTERIZED 27 266 IPR012864 GO:0016702
Vvi17g0565 270 SUPERFAMILY RmlC-like cupins 22 224 IPR011051 -
Vvi17g0565 270 Gene3D Jelly Rolls 23 236 IPR014710 -
Vvi17g0565 270 CDD cupin_ADO 97 210 - -
Vvi17g0565 270 Pfam PCO_ADO 58 267 IPR012864 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0565 Vvi-Chr17 6286135 6289434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0565 K23953 - vvi:100260282 569.311