Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0562 ATGGACCATCAATGGCGGCCTCGACCAATTCAAGGTAATATCTGTCCTATCTGTTCAATTTCTCACTTTCCATTCTGCCCTCCACATCCCTCACTTGATCAATACCCAAGATTTTCTTTGGAGAACAATCGGTTATTTCAAAGACCTGTTTTGGATCCGCTTATTGATAATCGTGCACACCCGTTTGTGGGTTACCCGAACGATGGGTATGGGGATCCGCGATTTTGGAATAGAAACCCTAATTTAGAGAGGGATGCGTATGTGCAATTTCCATTTCAGCCTCAGATTGGTGGGGTTCATAGGGATGGGTTTGGATCGACGGTTTATGATTATGGTAAGAATGATTTTCTGAGTGGAGGTGACAGAAATAGTAAGAGGATGAGGTTTGATGAGACGGCTTCGGGTTCTTTTTCGAATGATTATCATTTAAATCCAACAAGGGTTATGTCGGAGGATGAGCGAAGGTTGAAGTTGATACGCGATCATGGGGGCGCCTCTAGTGGTGTGCCACATGGTGGGACAGTGTCGGGCTTGGGAATTAGTGCGGGTTTTAATGGCGAAATTAAAGAGTATAGTCATGAAAACTCAACTTCAGAGAGGAATTTCGGGAACAGCGAAGTTGTGGATCGTGGAAAATTTGATGACTTCCGGGGCTGTAGGGGTGAAATTCAGATGAACAATATTCATGACGCAGGGTTTGGTTCTGTTGAAAGAGAAGGGTCATCTTTTAGAGAGGAACATGGTTCGACCTTTGGACAACAATATATGCAGATTAATAGAAATGGATTTCAGTCTAATGTAGACCATAGTGTTTTCAGAAATGAGGGTGATGGAGTCCATTCTCAAAATGAAGGACTGAAGCAATCTCAATATTTTCAAAATGAGCATCCTCCGCATCCTTCTTTGCCAACCTATGGACATAATGGTCTCCCCACTAGGGTTTCCGACAATGTTGGGCTATCCCATTCATCACAACATGGGCCTTATCCCATTCTTGAAGTTCAGAATGAGAACTATAATGGTCACAATCTTCAACATCTTCAGCTTAAGAATTCCATGTCAGTGAAGGAGCCTCCGTATTCCCATATACCAAATTGGCAGGTGTCGTCAGGTTTGAGTGTACCATACCATGAAAAGAGAGATAGTCTAGCAGGGGATGGTGCTTCTAACAATCTTCCTGGGCAGCCTTACACATTTGAACATCCAGTTAAGCAGAAACAAGATTTCCAATCCCATGTACAGCTAAGTGATGTGAGACAGTCATTTGAAGTTAGATTTCCATCACAGGAGGGCAATCAGGGTACAGTTTTACATCAAAATTCACCTCTAGGAGCTCAATATGGTAGTCACAGACAAGGTGGTTACTTGCCAATCCACACTGGTAGTAACATAGTTTCCGAAGGCCTGAGTCAGATGCAGGCGTCCCGGTCATTTCATGTCCAGCCTCCACTTCCTGCCTCTCCGCCACCACCTCTTCCAGTGGACCCGCCAGGTCATACTTCATCAAAATCAAAAACTTCATCCTCAGCTCCCATGAAATCCTCTCCACTCTTTCCAGTTCCTGCTGGTTCTTTGGCTATGGCACCATCATCATACCCTCCAGTTCCTGGAGCCAACTCCTTGTCGCAACCCTATTTTCATAATAAATCACATCTACATGCCTCAACTGGCTTTGCTACAGAGGAACCTCAGGATATCCGTGGGACATCTTCTAAGCAATATTTGGCAGAAGGTCAACCCTACCTGATCAAGCATCCGTCTTCAGAGAAGCCTAATTCTATTGATGCTTCCCACTTATTTAAGCAGCCACATCGAGTTGGCCGTCCTGATCATGTTGTGATAATTCTTCGAGGTCTTCCAGGTAGTGGAAAGAGCTACTTAGCTAAGATGTTACGTGACCTTGAGGTTGAAAGCGGTGGCGATGCTCCGCGAATTTATTCCATGGATGATTATTTCATGACTGAAGTTGAAAAGGTTGAGGAGAGCGAGAGTATGAAATCTTTTTCAGCTAGAGGCAAGAAACCAATTGTGAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAAGAGGCATATCGAGCAAGCATGTTGAAAGCATTTAAGAAGACCCTTGAGGAGGGAGTGTTCACCTTCATAATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGATATGAAGTTTACCTTTTAGAAGCTTCATACAAGGACCCTGCGGGTTGTGCAGCAAGGAATGTGCATGGTTTCACCCAAGATGACATACAAAGGATGGCTGGACAATGGGAAGAAGCTCCGTCCATGTACTTGCAGCTGGACATCAAGTCATTATTCCAAGGGGATGATCTGAAGGAAAGCGGGATTCAGGAGGTAGATATGGACACAGAGGATGGGGATTGTGATGGAGGTCTATCCGGATCACAAGAAGAGAAATCTGAGAAGGTCGCAGCACCTCCTGTGGAAGATTATGCACCTGATGGTTCTTCAAAGGATGGCAAGAGATGGGATGCTGAAGGAGACCATCCGGCAGAAGTGAAAGAGTTAGGTTCAAGTAAATGGTCAAATGATTTAGATGAAGATGATACTGAAAAATCTAGAGGCCCAAAGGAAAATTTAAATGCCCTGTCTGGGTTAATTCAAGCATATAGTAAGGGAGGTAAATCTGTACATTGGGGTGACCAGGCTGGGAATACTGGATTCTCAATAGGTACAGCAAAGAAGGCAAACTCTTTAGTCATTGGACCTGGTGCTGGATACAACTTGAAGTCAAATCCGTTGCGTGAGGAGGAGAATTCAACCTCAAGCGGAAATACTGGAGGGTCCAAGAGGACAAGTATGTTCCAAGAGCAACTCCGAGCAGAGCGTGAGTCCTTCAGAGCTGTTTTTGACAGGAGGCGACATCGGATTGGTGGACTCGATGCAGATGAGGAATCATAA 2967 0.4466 MDHQWRPRPIQGNICPICSISHFPFCPPHPSLDQYPRFSLENNRLFQRPVLDPLIDNRAHPFVGYPNDGYGDPRFWNRNPNLERDAYVQFPFQPQIGGVHRDGFGSTVYDYGKNDFLSGGDRNSKRMRFDETASGSFSNDYHLNPTRVMSEDERRLKLIRDHGGASSGVPHGGTVSGLGISAGFNGEIKEYSHENSTSERNFGNSEVVDRGKFDDFRGCRGEIQMNNIHDAGFGSVEREGSSFREEHGSTFGQQYMQINRNGFQSNVDHSVFRNEGDGVHSQNEGLKQSQYFQNEHPPHPSLPTYGHNGLPTRVSDNVGLSHSSQHGPYPILEVQNENYNGHNLQHLQLKNSMSVKEPPYSHIPNWQVSSGLSVPYHEKRDSLAGDGASNNLPGQPYTFEHPVKQKQDFQSHVQLSDVRQSFEVRFPSQEGNQGTVLHQNSPLGAQYGSHRQGGYLPIHTGSNIVSEGLSQMQASRSFHVQPPLPASPPPPLPVDPPGHTSSKSKTSSSAPMKSSPLFPVPAGSLAMAPSSYPPVPGANSLSQPYFHNKSHLHASTGFATEEPQDIRGTSSKQYLAEGQPYLIKHPSSEKPNSIDASHLFKQPHRVGRPDHVVIILRGLPGSGKSYLAKMLRDLEVESGGDAPRIYSMDDYFMTEVEKVEESESMKSFSARGKKPIVKKVMEYCYEPEMEEAYRASMLKAFKKTLEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYLLEASYKDPAGCAARNVHGFTQDDIQRMAGQWEEAPSMYLQLDIKSLFQGDDLKESGIQEVDMDTEDGDCDGGLSGSQEEKSEKVAAPPVEDYAPDGSSKDGKRWDAEGDHPAEVKELGSSKWSNDLDEDDTEKSRGPKENLNALSGLIQAYSKGGKSVHWGDQAGNTGFSIGTAKKANSLVIGPGAGYNLKSNPLREEENSTSSGNTGGSKRTSMFQEQLRAERESFRAVFDRRRHRIGGLDADEES* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0562 988 MobiDBLite consensus disorder prediction 935 957 - -
Vvi17g0562 988 MobiDBLite consensus disorder prediction 482 497 - -
Vvi17g0562 988 MobiDBLite consensus disorder prediction 475 516 - -
Vvi17g0562 988 MobiDBLite consensus disorder prediction 429 454 - -
Vvi17g0562 988 MobiDBLite consensus disorder prediction 836 878 - -
Vvi17g0562 988 FunFam YLP motif-containing protein 1 isoform X3 612 776 - -
Vvi17g0562 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 782 IPR027417 -
Vvi17g0562 988 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 120 975 IPR026314 GO:0005634
Vvi17g0562 988 MobiDBLite consensus disorder prediction 429 447 - -
Vvi17g0562 988 MobiDBLite consensus disorder prediction 499 514 - -
Vvi17g0562 988 Gene3D - 611 777 IPR027417 -
Vvi17g0562 988 MobiDBLite consensus disorder prediction 378 399 - -
Vvi17g0562 988 MobiDBLite consensus disorder prediction 798 882 - -
Vvi17g0562 988 MobiDBLite consensus disorder prediction 928 962 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0562 K17602 - vvi:100265726 1986.07