Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0561 ATGGCAGCAGCAGCAGCTGGGCGGTTCATGGATCTAGATTTAAGGAAGGGCCACCTCGGAAGCTCACCGCACCCTACCAGCCACTCGCTTCATGTATTCCATCAAAGGTATGAGTCGTGTTCACTGTCGATGAATGGTTGCCAAGGAGACCCCAAAATTCCCATTGGAACCATCCAGACTCGGACGTTTCCAGGCGTTTCAACGCACTCACTCGCCCTCGACACCCTCAGCTCCGCCATCTCCCACTTGAAATCCGACCCACCTCCCTTCACCTCCGGGATTCTACGTCTCCAGGTCCCAATTCAACAGAAAATTGAAGCAATTGATTGGCTCCACGCTCAACAAGAGCTTCTTCCCCGCTGTTTCTTCTCCAGTAGAAGCCAAAGTAGCAGTTTTGATCCATTCATAGACTCCGTCAACGGAGATGGCAACGGTTTAGAGGACCACGATTTGGTTAGGGTCGCCGGCATCGGCGCTGCAGTGTTCTTCCGACATATTCATCCATTCTCATTGGACGATTGGAAGTCCATAAAGAGGTTTCTTTCCAAGAAATGCCCTTTAATTCGTGCATACGGGGCTATTCGGTTTGATCCAAGAGCTAATGTATCATCTGAATGGAGGGCTTTTGGTTCATTCTACTTTGTGGTTCCTCAGGTGGAGTTTAATGAGCTTGAAGGAAGTTCAGTTCTTGCTACAACTATTGCATGGGATAATGCCCTTTCATGGACATGGGAAAAGGCAATTGGTGCACTTCAAGCTACAATGTGCCAGGTTTCTTCTATTGTTGGGAAGTTGAGGAAAGAAGTTTGTAAAACATTTGTCCTCAGCAATAGTCATGTTCCTAGTAAGGCATCTTGGAATCTTGCTGTTAATAGAGCTTTGCAGATAATTGGCAGAGCTGACTCACCCCTCATTAAGGTGGTACTTGCACGTAGCAGCAGGGTTGTGACTACTTCTCATATTGACCCTATAGCATGGTTGGCTTGTTTACAGGTTGAGGGACAAAATGCTTACCAGTTCTTTCTTCAGCCACCTGATGCACCAGCATTTATTGGGAACACTCCAGAGCAACTATTTCACCGAAAACGGCTTTGCATCCACAGTGAGGCTTTGGCTGGAACCCGTGCTAGAGGTGGATCAAAGGCTCAGGATCTTCAAATAGAACTTGATTTACTTTCAAGTCCCAAGGAAGACTTTGAGTTTTCTATTGTACGAGAGAGCATACAAAGAAAGCTGGAGGCCATATGCAGCACGGTGTGGGTTGAACCAAAGAAAGCAATTCGAAAACTCCCCAGAATTCAACATCTATATGCCCAATTGTCAGGACGATTGAGAAGTGAAGATGATGAGTTTGACATCTTGTCTTCTCTTCACCCAACTCCAGCAGTTTGTGGGTTTCCTAGAGAAGAAGCACGGCTTTTAATCGCTGAAACTGAAATGTTTGACCGAGGAATGTTTGCCGGTCCAGTTGGATGGTTTGGTGGAGGAGAGACTGAGTTTGCAGTTGGGATCAGGTCAGCCTTAGTGGAGAAGGGTCTTGGTGGATTAATCTATGCTGGAACTGGGATAGTTAGAGGAAGCAATTCATCTTTAGAGTGGGAGGAGCTGGAGCTCAAGATATCTCAGTTCACCAAACCAATAAAAGTTGAGGTGCCTCTCTCCTGA 1665 0.4667 MAAAAAGRFMDLDLRKGHLGSSPHPTSHSLHVFHQRYESCSLSMNGCQGDPKIPIGTIQTRTFPGVSTHSLALDTLSSAISHLKSDPPPFTSGILRLQVPIQQKIEAIDWLHAQQELLPRCFFSSRSQSSSFDPFIDSVNGDGNGLEDHDLVRVAGIGAAVFFRHIHPFSLDDWKSIKRFLSKKCPLIRAYGAIRFDPRANVSSEWRAFGSFYFVVPQVEFNELEGSSVLATTIAWDNALSWTWEKAIGALQATMCQVSSIVGKLRKEVCKTFVLSNSHVPSKASWNLAVNRALQIIGRADSPLIKVVLARSSRVVTTSHIDPIAWLACLQVEGQNAYQFFLQPPDAPAFIGNTPEQLFHRKRLCIHSEALAGTRARGGSKAQDLQIELDLLSSPKEDFEFSIVRESIQRKLEAICSTVWVEPKKAIRKLPRIQHLYAQLSGRLRSEDDEFDILSSLHPTPAVCGFPREEARLLIAETEMFDRGMFAGPVGWFGGGETEFAVGIRSALVEKGLGGLIYAGTGIVRGSNSSLEWEELELKISQFTKPIKVEVPLS* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0561 554 Pfam chorismate binding enzyme 283 539 IPR015890 -
Vvi17g0561 554 Gene3D Anthranilate synthase 72 548 IPR005801 GO:0009058
Vvi17g0561 554 NCBIfam isochorismate synthase 189 545 IPR004561 GO:0008909|GO:0009058
Vvi17g0561 554 PANTHER - 35 552 IPR044250 GO:0008909
Vvi17g0561 554 FunFam isochorismate synthase, chloroplastic-like isoform X1 72 549 - -
Vvi17g0561 554 SUPERFAMILY ADC synthase 149 548 IPR005801 GO:0009058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0561 K02552 - vvi:100243400 1091.64