Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0557 ATGGCAAGCGTTGAAGGGGCAAAAGAGGGGAAGACGAGGAGGAACTCTTCCGATCACCTGTCGTTCCAAGATATTGTTCCATCTTCTGGTTGGAGTGAGGATGAAAAATGTCACTATCTCCTTGTTGATCTTCCTGGTTTCAAGAGGGAGGAGGTGAAGCTTCAAGTTGATTATCAGACCAACCAACTGATGGCCAGTGGAGAAAGGCGGGTAAGTGAATTAAAATACATCCGGTTTAAACAGACCTTTAAACTGCCAAACAATTCAGATATCGAAAAGATCACTGCAAAATTTGAAGGCGAAATTCTCTATGTAATTGTCCCTAAAGTCAAGGAACAGAAGGAAGAACCTAAGGAGGAGAATGGGACTGCCAGCACCGTTGCGGAAGAGAATGTGAATGAGAAGCCCAACAAAGGTGATGACAAACAAGGTGAGAATATAGATGGGGAGAGAAACAAACAGTGTGAAGGTGTGGATAAAGTGTTCAAAGAGAAATTAGGGCGTGATGCTGGTCTATTGGAATGCGTGATATCAAAGTTGAGAAAGAACAAGGGGATTGTTATGACAGCCGTCTTAGCATTTTCTTTGGGGGTGTTTATCACTCGAAAATTTGAATCAGGTGGGGAATGA 630 0.4302 MASVEGAKEGKTRRNSSDHLSFQDIVPSSGWSEDEKCHYLLVDLPGFKREEVKLQVDYQTNQLMASGERRVSELKYIRFKQTFKLPNNSDIEKITAKFEGEILYVIVPKVKEQKEEPKEENGTASTVAEENVNEKPNKGDDKQGENIDGERNKQCEGVDKVFKEKLGRDAGLLECVISKLRKNKGIVMTAVLAFSLGVFITRKFESGGE* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0557 209 Gene3D - 4 119 IPR008978 -
Vvi17g0557 209 MobiDBLite consensus disorder prediction 1 21 - -
Vvi17g0557 209 MobiDBLite consensus disorder prediction 133 150 - -
Vvi17g0557 209 MobiDBLite consensus disorder prediction 114 150 - -
Vvi17g0557 209 CDD ACD_sHsps-like 31 108 - -
Vvi17g0557 209 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 30 118 IPR031107 -
Vvi17g0557 209 SUPERFAMILY HSP20-like chaperones 22 118 IPR008978 -
Vvi17g0557 209 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 20 125 IPR002068 -
Vvi17g0557 209 Pfam Hsp20/alpha crystallin family 32 118 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0557 Vvi-Chr17 6180356 6181177 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0557 - - vvi:104882318 401.749