Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0550 ATGACTCTCTCCATCACCTCCCTCTCTAATTCAAACAACATTTTAGCTATCAAGTCTTCTATAACCAGAGATCCTACACAAGCTGGGAAAGAAATGGATGGAGAGCAGCAGCTAAGCACATGGGAAGGGTATGTAGATTGGAGGAACAGACCTGCTGTGAAAGGCCGTCATGGAGGCATGCTTGCTGCCTTCTTTGTCTTGGTTGTTGAGGTGTTGGAGAACTTGGCATACCTGGCAAATGCAAGCAACCTTGTGCTTTATCTGTCAAAATTCATGCATTTTTCACCATCCAGTTCTGCCAATATTGTTACCAACTTCATGGGCACGGCCTTCCTCCTTGCTCTCCTTGGTGGCTTCTTGTCTGATGCTTTCTTCTCAACTTATCTCATCTATTTGATAAGTGCTGCAATAGAACTTGTGGGTTTGCTAATACTTGCAATCCAAGCTCACGTGCCTTCACTGAAACCACCGGCCTGTGATTTGGGCAACATCAGCAATCCATGCAGGGAAGCTGATGGTGGGAAAGCAGGAATGTTATTTGCAGGCCTCTATCTTGTAGCATTAGGTGTTGGAGGAATAAAAGGTTCACTTCCACCACATGGGGCTGAGCAGTTTGATGACAATACCCCCAAGGGAAGGAAACAGAGATCAACATTTTTCAACTACTATGTGTTCTCCCTCTCTTGTGGGGCTCTAATTGCAGTAACTTTTGTGGTATGGATTGAAGACAACAAGGGCTGGCAATGGGGTTTTGGTATCTCCACTGCATCAATACTGATCTCTATCCCAATATTCCTCCTTGGCTCTGCCACTTACAGAACCAAAATTCCCACAGGAAGCCCCATCACAACCATCGTCAAGGTTCTGGTTGCAGCAATTTGCAATGCCTACAAGCTCAGAAATTGCAGCAATTCTGTCATGAGCATGGCCACGAGCCCATCATATACCACCGAAATCGGCGGGAAAGAAGAAAGCTGTTCCAAAGAAATGGTGCCTAGGCAAGCTCCAACAGAAAGCCTCAAGTTCCTTAATAATGCAGTGATAGACAAGCCATTCCATTCAGCATTAGAATGCACAGTAAAGCAAGTTGAAGAAGTAAAGATAGTGCTTAGGATTCTACCCATCTTTGCTTGTACCATAATGCTCAACTGCTGCCTTGCCCAACTGTCCACCTTTTCTGTCCAACAAGCAGCTACCATGAACACCAAGCTCGGAACCTTGAAGGTCCCACCAGCTTCTCTCCCCATCTTTCCTGTCCTCTTCATCATGATCCTTGCACCAACCTACAACCATATCATCATCCCATTCACCAGGAGAACAACTAAAACCGAAATGGGGATAACCCATCTGCAGCGAATTGGGACAGGGCTAATTCTCTCCATTGTGGCCATGGTAGTGGCAGCCTTCGTGGAGATAAAGCGAAAAAGGGTGGCAGCAGAATCAGGACTAGTACATTCCTCAGAACCTCTACCAATCACGTTCTTTTGGGTGGCTCTGCAGTACTTGTTCCTGGGGTCTGCTGATCTTTTCACCTTGGCTGGACTGATGGAATTCTTCTTCACAGAGGCCCCTACAAGCATGAGATCTTTAGCGACCGCCCTTTCCTGGGCCTCACTGGCCATGGGTTACTACCTCAGCTCTGTGCTTGTATCAATAGTCAACAGTGTCACCAATTCCTACAGTCACCATGCATGGCTCTTCGGCAACAACTTGAATCACTATCACCTTGAGAAGTTCTACTGGTTGATGTGCGGACTAAGTGGATTAAACTTTTTGCATTATCTTCTCTGGGCAAGTCGCTACAAGTACAGGACTGCAAGCCCAGATAACTGA 1833 0.4637 MTLSITSLSNSNNILAIKSSITRDPTQAGKEMDGEQQLSTWEGYVDWRNRPAVKGRHGGMLAAFFVLVVEVLENLAYLANASNLVLYLSKFMHFSPSSSANIVTNFMGTAFLLALLGGFLSDAFFSTYLIYLISAAIELVGLLILAIQAHVPSLKPPACDLGNISNPCREADGGKAGMLFAGLYLVALGVGGIKGSLPPHGAEQFDDNTPKGRKQRSTFFNYYVFSLSCGALIAVTFVVWIEDNKGWQWGFGISTASILISIPIFLLGSATYRTKIPTGSPITTIVKVLVAAICNAYKLRNCSNSVMSMATSPSYTTEIGGKEESCSKEMVPRQAPTESLKFLNNAVIDKPFHSALECTVKQVEEVKIVLRILPIFACTIMLNCCLAQLSTFSVQQAATMNTKLGTLKVPPASLPIFPVLFIMILAPTYNHIIIPFTRRTTKTEMGITHLQRIGTGLILSIVAMVVAAFVEIKRKRVAAESGLVHSSEPLPITFFWVALQYLFLGSADLFTLAGLMEFFFTEAPTSMRSLATALSWASLAMGYYLSSVLVSIVNSVTNSYSHHAWLFGNNLNHYHLEKFYWLMCGLSGLNFLHYLLWASRYKYRTASPDN* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0550 610 Gene3D MFS general substrate transporter like domains 32 608 IPR036259 -
Vvi17g0550 610 Pfam POT family 132 566 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vvi17g0550 610 CDD MFS_NPF4 60 600 - -
Vvi17g0550 610 SUPERFAMILY MFS general substrate transporter 53 605 IPR036259 -
Vvi17g0550 610 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 58 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0550 Vvi-Chr17 6144991 6147880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0550 32 605 Organic Solute Cotransporters AT1G69850 70.719 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0550 - K14638 vvi:100255336 1145.57