Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0524 ATGGATCCCACACGCAAAAAGCACCCCAAATCCTCCTCCACCCCCTCCTCCACCTCTGCTCTCTCAGATCCCTCTGCCCACAAAATCTCAAACCATTTCTCCCGGCACAGACTCCACACTTCCCTTAAACCCAACAATCCGCCGCCTCGTGTGGACACCCGTTTGCAGGCTAAGGCCATGACAGTTTCCCTCATAGGTGCTGACTCCTCCAATGCTTTTATCATCAAGCCAAACCGCAAGCACGCAGCGCCTGCAGCAAAAATGGATGCACCACCCCCAGCTGAAAGCAAGGAGAGGCTGAAGAAGTCTCCAGTGAAGAAAGAAAAGGAGAAGAAAGAATCTCAGGACAGGCGCGATATCAAGAAACTGTCCTCTAAAGAAGTCAATGATATCAACAAAGTATTGAAAGTAGCCAAAGAAAAAGAATCTCAACAGGGACATGGACATGATATCATGAGGCGGCCTTCTTTTTCTCTTGGCAGGAGAAGATCTTTCTGCTGCTCACAAGTTGAGTTAGCTGGTTTCTTGGCCAGCACTGGGGTGAAAGTTGTGTCTGTTGACATGCCACCCTTTATGCAGATCCATGCTGTGGATTGTGCAAGGAATGCTTATGACAGCTTGGAGAAGTTCACTTCCAAGACCCTTGCCATGACTCTAAAGAAGGAATTTGATGGGGTATATGGACCAGCATGGCATTGTATTGTTGGGACAAGCTTTGGGTCCTTTGTAACACATTCAGTTGGAGGGTTTATGTATTTCGCAATGGATCACAAGTTGTATATCCTCTTGTTTAAGACCGCTGTACAGAGAGCAGATTGA 819 0.4737 MDPTRKKHPKSSSTPSSTSALSDPSAHKISNHFSRHRLHTSLKPNNPPPRVDTRLQAKAMTVSLIGADSSNAFIIKPNRKHAAPAAKMDAPPPAESKERLKKSPVKKEKEKKESQDRRDIKKLSSKEVNDINKVLKVAKEKESQQGHGHDIMRRPSFSLGRRRSFCCSQVELAGFLASTGVKVVSVDMPPFMQIHAVDCARNAYDSLEKFTSKTLAMTLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFMYFAMDHKLYILLFKTAVQRAD* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0524 272 MobiDBLite consensus disorder prediction 80 125 - -
Vvi17g0524 272 MobiDBLite consensus disorder prediction 1 52 - -
Vvi17g0524 272 FunFam Dynein light chain 171 267 - -
Vvi17g0524 272 PANTHER DYNEIN LIGHT CHAIN 180 266 IPR001372 GO:0007017|GO:0030286
Vvi17g0524 272 MobiDBLite consensus disorder prediction 92 125 - -
Vvi17g0524 272 SUPERFAMILY DLC 177 266 IPR037177 GO:0007017|GO:0030286
Vvi17g0524 272 MobiDBLite consensus disorder prediction 10 28 - -
Vvi17g0524 272 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 176 267 IPR037177 GO:0007017|GO:0030286
Vvi17g0524 272 Pfam Dynein light chain type 1 181 266 IPR001372 GO:0007017|GO:0030286
Vvi17g0524 272 SMART Dynein_light_2 176 266 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0524 Vvi-Chr17 5844511 5845486 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0524 - - vvi:100263952 487.263