Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0519 ATGGCCTGGCGATCATTCAAGCGGATTGTGGAGCAGGAGCTTGGATACTTGCCCCAGTTTGTGATCTATGCAATCCTGGAATGGGTGGTGATAATTTTGCTTTTTCTTGATGGGTTTATTGGATTTGTTGCCAATGAGTTTGCAAAGTTTTTTGAATTGAAGACACCATGTTTGCTTTGCACTAGGATTGATCATGTTCTCGTTCATCGGAATCCCAGCTTTTACTATAACGATTCCATATGTGAAGATCACAAGAAGGATGTTTCCTCTCTTGCCTACTGTCACGCTCACAGGAAGTTATCTGATATCCGGATGATGTGTGAGGGATGCCTCATTTCTTTTGCCACTGAGAGAGGAGATGATTGTGAGACACACAGATCTTTGGTTGGGATTTTGCATAACACTGTTGAGCCCTTTGTTGATAATGACCACAAAATGCAAGTGAAATTGCCTGTGGGACAAGTTGACAAGAGTGGTGTTCACCAGTGTTCTTGCTGCGGGGGGCCTTTGAAGATGAGAGCCTCCATGACCAAGGGTCATGTTCCCCGCTCTGCAAGCCATGGGAACCTTCTTTCACAAGCTCCTACACCTTCTCCTCGAGCTCCATTTTTTGCAACGAGAAATGAGGATTTTCGTCACTTGGAATTGCCTCAAATTCGGCACATGGATCTCAAATTCTCGTCGGATAATGAATCAGAGCTTCTAGAGGATGAGTATAGCTCATATGCATCAATCCAAGGTAGGGAAGATGTTAAAGCTTGTACTGTGCCCTTGCTAACAGAATCTGAGGATTCAAATGAAGAAAGAACCCCTATGGGGTTTTCTAGAGGAAATAGGTTTTTTGGAATCTCTCTGACAGATTCAGCCACATCCAGTCCTAGGTGGGCTACCAGGTTGCCAAGGAAACCGGTGCTTGAGAAGGCGGAGTTTGTCTTGGAGCCTCTTGAGGGAAATGCTGCAAATGAAGCAGATTCTGATTCCACCATGCAACGTTTGAAGAGGCAAGCACGTCTGGATCGCAAGTCATTAATAGCTTTGTACATGGAACTGGATGAAGAAAGAAGCGCTTCTGCTATTGCAGCAAATAATGCAATGGCCATGATCACAAGGTTGCAAGCAGAGAAAGCATCAGTTCAGATGGAAGCCTTACAGTATCAGAGGATGATGGAGGAGCAGGCTGAATATGACCAAGAAGATTTGCAAGCAATGAGGGATTTGCTTGGCAAGAGAGAGGACGAAATCAAAGCTTTAGAGGCTGAACTTGAGATGTATCAACCGAAAAATGAAAGCAGCAAGAAATTCACTGTTGAGGGATGTGATTCAATTGAAATACAGGGTGATGAAGATGACCAACAGTTGAAATCTGAGTCCTTAAGTGAAAAATCTGAATGCAGCAGCCCTGCTTTTTGCTTCAATGAAGTGGAGAATAATGGAGAACACCAGCATAAATATGATCAAACGAGGTCATTGCAAGAAGAGAATGGAGGGGAGACCATTGAAAAATCATCAGGGGATTTTGAGGGCGAGAGATCCAATCTTCTAAATCAGTTGAAAAATATGAAGAAGTTTCACTCATCTGCACACAGTGGGAGGCATTCCTTGCAGCTGAGCTTTGACATGGTTAACGATACAGAGGAAGGCACAGGGGATGCATGCAATGATATAATATCAAGAGAAGTGCCTCATCTCCATGAGAAATTAAAAGCTCTTGAAGAAGATGGTGGATTCTTGAATCATGCTGCTCGGGCACTTGAGAAGGGAAGTGAAGGAAGAAACATTTTGACACAGATAGCTCACCATCTGCATAAGCTTCAAGACCTGGTGAAAATTCCCTTGGAGGATGATTGCGAATGA 1854 0.4369 MAWRSFKRIVEQELGYLPQFVIYAILEWVVIILLFLDGFIGFVANEFAKFFELKTPCLLCTRIDHVLVHRNPSFYYNDSICEDHKKDVSSLAYCHAHRKLSDIRMMCEGCLISFATERGDDCETHRSLVGILHNTVEPFVDNDHKMQVKLPVGQVDKSGVHQCSCCGGPLKMRASMTKGHVPRSASHGNLLSQAPTPSPRAPFFATRNEDFRHLELPQIRHMDLKFSSDNESELLEDEYSSYASIQGREDVKACTVPLLTESEDSNEERTPMGFSRGNRFFGISLTDSATSSPRWATRLPRKPVLEKAEFVLEPLEGNAANEADSDSTMQRLKRQARLDRKSLIALYMELDEERSASAIAANNAMAMITRLQAEKASVQMEALQYQRMMEEQAEYDQEDLQAMRDLLGKREDEIKALEAELEMYQPKNESSKKFTVEGCDSIEIQGDEDDQQLKSESLSEKSECSSPAFCFNEVENNGEHQHKYDQTRSLQEENGGETIEKSSGDFEGERSNLLNQLKNMKKFHSSAHSGRHSLQLSFDMVNDTEEGTGDACNDIISREVPHLHEKLKALEEDGGFLNHAARALEKGSEGRNILTQIAHHLHKLQDLVKIPLEDDCE* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0519 617 ProSiteProfiles GTD-binding domain profile. 327 425 IPR007656 -
Vvi17g0519 617 Pfam Zein-binding 331 421 IPR007656 -
Vvi17g0519 617 PANTHER MYOSIN-BINDING PROTEIN 2 1 606 IPR039306 GO:0017022
Vvi17g0519 617 Coils Coil 361 381 - -
Vvi17g0519 617 MobiDBLite consensus disorder prediction 479 507 - -
Vvi17g0519 617 Coils Coil 400 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0519 Vvi-Chr17 5809177 5811323 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0519 - - vvi:100251925 1208.74