Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0514 ATGGCTGGGACAAGCAAAGATGGCATGTATGGAATTCATGACTACTTCATGCAAAGCGACGAACGCCAGAAGAATGGTGCAGGAGATTCCGTTTCCGATTCCGGCTGCAATCTTGAACTGACTCTGGGAGGAAGCTACGGCGACTTTGACGACGAAATGCCAGTTCTAACTCTATCATCTTCTGTATTCGAAAGCGACACTATGGAGGAAGATTCCGGAGAACCCAATGTTCCCCCTCCGGCGGAGTTTGCGGTGGAGGGCTCATTTCTCTCGCTTGGGATGTCATTACCGCCACCGGTCCTGGAGATGAAGACGATGAAAGAACTACAGACAATGAGGAGACAGGAGGTGAAGAAAAGGCTGATGGGGAAAAACAGGAACAGAGGCAGACCTCCACTACCCAACCAAAGCCAAACTCGGGTTTTGTTGCCCGCAGTGTTTCAATTAGCTCCGCCTTCCAAGACAGTTCCACCGTCATCGCCACCTCTTCTTCAGCCTCTGTGTCCGACGCCAATGTCATTCCGGCTGCCAACGCCAATCTCACCTCCTCTAAAACCGTCGTCTCCACCTCTGTCTCCGACTCCGTTGTCATTTTACATGCCGCCACCACCACCAACTCCATCAACTTCATCTCCGCCTCTGTCACCGAGGCCACTGTCATTCCGCTTGCCAACGCCAACGCCACCACCACCACCGCCACCTCCTCCGCAGCATTCTTCTCTGCCTTTGTGCCCAATGCCATTGTCCATCCTACCGCCACATCGGCAGTCTTCTTCTCCCCCTCTCTCTCCAATTCCATTATCATTCCGACTGCCGTTGCCTGCACCCCACTCTCCGTCCGAATTATCCCCTTTGGTTTCTGATCCTGCTCCCCCTACTCTACTGCCTCCGGTTCCCACTCATCCCCATTTTCCAGCCAAAGGCGAGGGTCACAAAATGGCTATTCCAGTGGAACCAGAAAGTCTCCCAGTTGACATCCTAAGGGCTTTGGTAGTAAGATGGCTGCTGCAGCACAAATACAAAAGGCCTAGGGCTTCTGATAGAAGCGATCGGGAGACTGGTCTAGAGCTCATAAAACAAATGCCAACTGTGGTGACTACTGGTGCCGGGCCCAATGGGAAGAGGATCGAGGGGTTTCTCTATAAATTTGGAACAGGGCAAATCAGTCTCGTGTGTATTTGCCATGGCATGTTCTTCACTCCGGCCGAGTTCGTGAGGCATGCTGGTGGAGATGATGTGGAAAATCCCATGAAGCAGATTATCGTTTGTCCTGCGTCCTTTTAA 1284 0.5226 MAGTSKDGMYGIHDYFMQSDERQKNGAGDSVSDSGCNLELTLGGSYGDFDDEMPVLTLSSSVFESDTMEEDSGEPNVPPPAEFAVEGSFLSLGMSLPPPVLEMKTMKELQTMRRQEVKKRLMGKNRNRGRPPLPNQSQTRVLLPAVFQLAPPSKTVPPSSPPLLQPLCPTPMSFRLPTPISPPLKPSSPPLSPTPLSFYMPPPPPTPSTSSPPLSPRPLSFRLPTPTPPPPPPPPPQHSSLPLCPMPLSILPPHRQSSSPPLSPIPLSFRLPLPAPHSPSELSPLVSDPAPPTLLPPVPTHPHFPAKGEGHKMAIPVEPESLPVDILRALVVRWLLQHKYKRPRASDRSDRETGLELIKQMPTVVTTGAGPNGKRIEGFLYKFGTGQISLVCICHGMFFTPAEFVRHAGGDDVENPMKQIIVCPASF* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0514 427 PANTHER AFP HOMOLOG 2 21 425 IPR031307 GO:0007165
Vvi17g0514 427 MobiDBLite consensus disorder prediction 23 39 - -
Vvi17g0514 427 Pfam Tify domain binding domain 390 421 IPR032308 -
Vvi17g0514 427 MobiDBLite consensus disorder prediction 154 249 - -
Vvi17g0514 427 MobiDBLite consensus disorder prediction 277 310 - -
Vvi17g0514 427 MobiDBLite consensus disorder prediction 118 140 - -
Vvi17g0514 427 MobiDBLite consensus disorder prediction 277 303 - -
Vvi17g0514 427 MobiDBLite consensus disorder prediction 152 265 - -
Vvi17g0514 427 MobiDBLite consensus disorder prediction 21 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0514 Vvi-Chr17 5767356 5770324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0514 - - vvi:104882322 686.026