Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0504 ATGCCACCGCCGCCGGTGTTGCTGCCTGCCCCACCTTTTGGGCAAATGCGCCCAGAAGTGTTAAGGCCTCCACCACCTCCTAGTGTGCTACCACCTCCCCCTTCACAAGGACAAACGATGTACAGGGCGCCCGTTCCTCCATTGCCTGCTGGTGGTGTGCAGGGTCTTCAGCATATCATGCCGCCTGCCCCTCCACCAAATTCTAACTTCTTCAGTTCTGTTCCATTTGGATCTTTTGTACACCCAATTCCTGGAGATGCACACATGCCTCCTTCCATGGCTCTGCTGCCTCCACCTCCACCACCTCCACCACCTCCACCTTCTTCTCCACCACCCATTCCACCTTCTCCACCGCCACCCACCTCTCCTCTGCCCCCTGCGACTTCTATGGCCCACCATTGTGATTCTGCTTCCAGTTACAATAGACTATCTGGCCCTGAAGTCATCCTGAATCAGAGCAAAGATGATGGGCCTATGCATGATGACAGTTCGAACTGGGAAGGTGGAACTGGCCATGGGGCTAGCTCCTCCGAAAAGAGTGTGATGGTGGATCCTCCTCCACCACCTAAGCCAACAGATGAAAGAATTCTACAAAAGATTGAGGTTTTATGCCAGTTTATTGCTAAAAATGGTCCTGATTTTGAAGATAAGGCTCGGAAGAATGAATCTGGGAATCCGGAGTTTGCATTTTTGTTTGGTGGTGAGCCAGGAAGTGAAGCTGCAATTGCACATGACTATTTTCTGTGGATGAAGAAGAAACGTGCGCTGGCAGTTAAAGCACATGAACGGCACAAACAAAGAGATTCACCATTAAGGCCTTTGGAAGTGGAGTCTTCAGTGCAGCCTAATTTATTGATGGATCCAGATGCATCGCATTCAGCTGCTGATTCTGACATGGAGATGGAAGGTAAATGTAACAAATGA 924 0.5011 MPPPPVLLPAPPFGQMRPEVLRPPPPPSVLPPPPSQGQTMYRAPVPPLPAGGVQGLQHIMPPAPPPNSNFFSSVPFGSFVHPIPGDAHMPPSMALLPPPPPPPPPPPSSPPPIPPSPPPPTSPLPPATSMAHHCDSASSYNRLSGPEVILNQSKDDGPMHDDSSNWEGGTGHGASSSEKSVMVDPPPPPKPTDERILQKIEVLCQFIAKNGPDFEDKARKNESGNPEFAFLFGGEPGSEAAIAHDYFLWMKKKRALAVKAHERHKQRDSPLRPLEVESSVQPNLLMDPDASHSAADSDMEMEGKCNK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0504 307 MobiDBLite consensus disorder prediction 1 193 - -
Vvi17g0504 307 MobiDBLite consensus disorder prediction 91 126 - -
Vvi17g0504 307 MobiDBLite consensus disorder prediction 132 148 - -
Vvi17g0504 307 MobiDBLite consensus disorder prediction 259 307 - -
Vvi17g0504 307 Pfam Surp module 200 249 IPR000061 GO:0003723|GO:0006396
Vvi17g0504 307 ProSiteProfiles SURP motif repeat profile. 199 247 IPR000061 GO:0003723|GO:0006396
Vvi17g0504 307 SMART surpneu2 197 256 IPR000061 GO:0003723|GO:0006396
Vvi17g0504 307 PANTHER SR-RELATED CTD ASSOCIATED FACTOR 6 188 254 IPR039037 GO:0006874
Vvi17g0504 307 MobiDBLite consensus disorder prediction 293 307 - -
Vvi17g0504 307 Gene3D Surp module 179 256 IPR035967 GO:0003723|GO:0006396
Vvi17g0504 307 MobiDBLite consensus disorder prediction 1 40 - -
Vvi17g0504 307 SUPERFAMILY Surp module (SWAP domain) 185 251 IPR035967 GO:0003723|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0504 - - vvi:100246698 503.056