Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0502 ATGCGTGCCTTTTCCTGTCAAGATATAGGTGAAGTTAGTAGGATCTTTTCGTGGTTTCTTGTAAAAGAAAGGTTCAAATTAGAAATCATGGGTCGTGGAGTCAGCAGTGGTGGGGGACAAAGTTCTCTGGGCTACCTTTTTGGAAGTGGAGAGGCTCCAAAACCTGCCACAAATAATGCTGAAGCTCCTCAAAATCAGGGACAGGTTGGAAGTAGTGGACCTTCTCAGATGTCTACTGCAGTTGCACCACCAGCGGTTGCACCACCAGCAGTTGCACCACCAGCGGGTGCACCACCAGCGGTTATTAATAAGCAGATTCCAGCGGGCGTCCAGGGTAACACTACAAACAACTATTTTCGAGCTGATGGCCAGAACACCGGCAACTTTATTACGGAGACTTTTGCGCCCTACATGCACCTTGCGCCATTCAAACTATACCCTCAAATATCTCAGTTGATCCTCACTGGATCGGCCTTCAACAAAGGTCCATGCGGCGCCTGGCGGTGGGTCTTCCCTAGGTTACCTGTTTGGGGATGGCAGCAACTGAGGCCTCCAGGCTTCAATAGTTCCCTGTTTGCCTAG 582 0.5 MRAFSCQDIGEVSRIFSWFLVKERFKLEIMGRGVSSGGGQSSLGYLFGSGEAPKPATNNAEAPQNQGQVGSSGPSQMSTAVAPPAVAPPAVAPPAGAPPAVINKQIPAGVQGNTTNNYFRADGQNTGNFITETFAPYMHLAPFKLYPQISQLILTGSAFNKGPCGAWRWVFPRLPVWGWQQLRPPGFNSSLFA* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0502 193 PANTHER SPR1 30 143 IPR039613 GO:0043622
Vvi17g0502 193 MobiDBLite consensus disorder prediction 45 85 - -
Vvi17g0502 193 MobiDBLite consensus disorder prediction 58 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0502 Vvi-Chr17 5652453 5657534 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0502 K18635 - vvi:100265524 166.392