Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0501 ATGAGGTGGGAAAGATTGCAGCTTCTGCGAGAAGAAGCTCCGGGAATGGGTGCTGTTGAGATTTCTGGGCCAGGGAAGAGGTGGGGACACACCTGCAACGCCATTAAAGGAGGAAAACTCCTCTATATTTTTGGGGGTTATGGCAAAGATAACTGTCAGACGAACCAAGTACATGTCTTTGACACTGTTAAAAAAACATGGAATGAGCCCATGATAAAAGGCAGCCCGCCTACTCCAAGGGACAGTCACAGCTGTACAACTGTTGGAGACAATCTGTTTGTGTTTGGGGGTACAGATGGGATGAATCCTCTCAAGGATTTGCATATTCTAGACACGTCTACACATACATGGATATCTCCAAGTGTAAGAGGCGAAGGACCAGAGGCACGGGAAGGTCATACTGCAGCCCTTATTGGGAAGCGACTTTTCATATTTGGTGGCTGTGGCAAATCTTCAAACGATTCGGATGAAGTTTACTATAATGATCTATACATATTGAACACTGAGACCTTTGTATGGAAACGCGCCCAGACATCGGGTACCCCACCAACTGCACGTGATAGCCACACTTGCTCATCTTGGAAGAACAAAATCATTGTGATTGGTGGTGAAGATGCATATGACTATTATTTATCTGATGTCCACATCCTTGATGCAGATACTCTTGTTTGGAGGGAGCTGAACGCTTCGGGTCAGATGCTGCCACCTCGAGCTGGTCATACAACAGTTGCTTTTGGCAAGAACTTGTTTGTTTTTGGGGGATTTACTGATGCCCAAAATCTTTATGATGACCTTCATATGCTTGATGCTGATACTGGTTTATGGACCAAGGTATTGGCTACAGGAGATGGACCTTCTGCTAGATTTTCTGTGGCTGGGGACATTTTGGATCCACAGAAGGGGGGTGTTCTCGTTTTTGTTGGTGGCTGCAACAAGACTCTTGAGGCACTCGATGATATGTACTATTTGCACACAGAACTTGTGAGAGAAAATGGGCGAGATGAGCGAAAGCTAGAGAGGCTATCTATGAGGAAGCAGTTGAAGCTAAAGTGCCAAGAACAATACCTTCCTGCGCCAGGACATGATAAAGCTCTGCTGACAGTTGGGGCGAATGCTGTTCTTTGCCAATCCAGGCCTTCGGCAAGTCATGGGCAAACAAGCCAACAAAATTTTCCAATTAATAGCTCCCAGATTCTTCAGGGAAAGAAGATATTTCAAGCGAACATTACCGAAAGCTTCCCTGATGGATTTACTATTGAAACTATTATAGATGGAAAGCCTTTGCGTGGAATATTATTTTCCAACAAGCCAAGCAATTCAAACATGGCTAAGTATAATTCCAGTAGGAAGAGAGCAGCTGGAGAAGTTGGTGGTATTAAGTTGAATGACAGTCAGAAGAGAAAACCAAAAAATGCTAGACCCTTCAAGCAGGATGAAATTGAGCACAGACAGGCTGATGTTGCCATAGGAAAGGAGTCCATATCATGTGAACGCCAAACAGAAGCCGCGGCTGCTGGTTTGAATAATTTAGCAACCCCTAATGATTCTCAGGCCCAGACAGAAGCTGCTGCTGCTGCTGTTTCAGAGAATCCAGAACCTACTGGTGATTCTCACCCTCAAAAGTCAATCCTGAAATTGGAATATGGAAGGACAAATGATGCACTGAACCAAAGCACTGAGTCTCCAGCAGAGATTACATCCACCGCCGCAAAGGAATGCATTTCTTTGCCCCCAAAAGAAGGAGACCATGGGGCACCAACCACTGAAGAGAAGGCAAAATCATTTTGA 1788 0.4497 MRWERLQLLREEAPGMGAVEISGPGKRWGHTCNAIKGGKLLYIFGGYGKDNCQTNQVHVFDTVKKTWNEPMIKGSPPTPRDSHSCTTVGDNLFVFGGTDGMNPLKDLHILDTSTHTWISPSVRGEGPEAREGHTAALIGKRLFIFGGCGKSSNDSDEVYYNDLYILNTETFVWKRAQTSGTPPTARDSHTCSSWKNKIIVIGGEDAYDYYLSDVHILDADTLVWRELNASGQMLPPRAGHTTVAFGKNLFVFGGFTDAQNLYDDLHMLDADTGLWTKVLATGDGPSARFSVAGDILDPQKGGVLVFVGGCNKTLEALDDMYYLHTELVRENGRDERKLERLSMRKQLKLKCQEQYLPAPGHDKALLTVGANAVLCQSRPSASHGQTSQQNFPINSSQILQGKKIFQANITESFPDGFTIETIIDGKPLRGILFSNKPSNSNMAKYNSSRKRAAGEVGGIKLNDSQKRKPKNARPFKQDEIEHRQADVAIGKESISCERQTEAAAAGLNNLATPNDSQAQTEAAAAAVSENPEPTGDSHPQKSILKLEYGRTNDALNQSTESPAEITSTAAKECISLPPKEGDHGAPTTEEKAKSF* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0501 595 MobiDBLite consensus disorder prediction 510 524 - -
Vvi17g0501 595 Pfam Galactose oxidase, central domain 139 192 - -
Vvi17g0501 595 Pfam Galactose oxidase, central domain 39 87 - -
Vvi17g0501 595 Pfam Galactose oxidase, central domain 89 138 - -
Vvi17g0501 595 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5 24 174 - -
Vvi17g0501 595 MobiDBLite consensus disorder prediction 551 568 - -
Vvi17g0501 595 Gene3D - 231 329 IPR015915 GO:0005515
Vvi17g0501 595 Gene3D - 3 230 IPR015915 GO:0005515
Vvi17g0501 595 MobiDBLite consensus disorder prediction 510 595 - -
Vvi17g0501 595 Pfam Galactose oxidase, central domain 236 286 - -
Vvi17g0501 595 SUPERFAMILY Galactose oxidase, central domain 21 256 IPR011043 -
Vvi17g0501 595 SMART kelc_smart 91 140 IPR006652 GO:0005515
Vvi17g0501 595 SMART kelc_smart 40 90 IPR006652 GO:0005515
Vvi17g0501 595 SMART kelc_smart 197 247 IPR006652 GO:0005515
Vvi17g0501 595 MobiDBLite consensus disorder prediction 461 478 - -
Vvi17g0501 595 MobiDBLite consensus disorder prediction 435 478 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0501 24 311 Acyl Lipid Metabolism Gene Families AT3G05420 28.000 1.86e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0501 - - vvi:100251831 1199.11