Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0500 ATGCAGAGACTCATCTCTCTCAAGGTTGCTTCAGACATCTCCAGAAGGGTCTTCACAAAACCTTCCTCCCTCCTACACTCTCATCCCAACAAAACCTTCTTTTCTCTCTCCCAACCATCCCCAACACACCACCTTCACACCACTTCTCTCATCCCACCACCCCACTTCCCATGGCCTTCCCACCACGGCCTTTCACGCAGTGTTTATGGGTTTATCTCTAATCCAACGCTCCTAAAACAGTTTTTGCCAACTGCCCTTTTGAAGGGTTCAAGCAAAACCCTCGCAGCTTCCAGAGTTGGGTTCCTCAGAGCTCAATTTCCCAGGCGGAGTTTCGGTTTCAGTCCATCCTTTGATTCCTACGGCCGCCGCTGGAGGTCATGGCTGTCAGGGCTAAGTACTAATGACGTTGTCTTGGGCTTGATTATAGCTAATGTAGCTGTTTTTATGTTATGGCGGATTTCAGACCATAGATTTATGTTGAACAACTTTACAATTTCGCTAGACAATTTTAAAAGTGGACGTATACACACATTGATAACTTCGGCATTTAGTCATATTGATATTGGGCATCTCATCTCCAACATGATCGGGCTTTACTTCTTTGGAATGAATATTGGAAGAGTTTTTGGACCTGAGTTTTTGTTGAAGTTATATCTAGCTGGGGCAGTGGTTGGCTCAGTGTTCTACTTGGTGCACCATGCTTTTATGGCCCCATCATCAAAGGGTCAACAAATGTGGAGCATAAACCCTTCAGCAATTCCAGGATTGGGGGCAAGTGGAGCTGTTAATGCTATCATGCTGCTTGATATATTCCTCTTTCCCAGATCCACTCTCTATTTGGAATTTTTTATACCAGTTCCTGCTATTTTACTGGGTATCTTTTTAATTGGGAAAGATATGCTGAGGATAATAGAGGGAGATGATCAGATCTCAGGATCAGCTCACTTGGGTGGTGCTGCAGTTGCAGCAATAGCATGGACCCGACTTAGGAGACGATTTTGA 1002 0.4471 MQRLISLKVASDISRRVFTKPSSLLHSHPNKTFFSLSQPSPTHHLHTTSLIPPPHFPWPSHHGLSRSVYGFISNPTLLKQFLPTALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFDSYGRRWRSWLSGLSTNDVVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTLITSAFSHIDIGHLISNMIGLYFFGMNIGRVFGPEFLLKLYLAGAVVGSVFYLVHHAFMAPSSKGQQMWSINPSAIPGLGASGAVNAIMLLDIFLFPRSTLYLEFFIPVPAILLGIFLIGKDMLRIIEGDDQISGSAHLGGAAVAAIAWTRLRRRF* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0500 333 SUPERFAMILY Rhomboid-like 135 331 IPR035952 -
Vvi17g0500 333 FunFam RHOMBOID-like protein 12, mitochondrial 130 332 - -
Vvi17g0500 333 Pfam Rhomboid family 171 331 IPR022764 GO:0004252|GO:0016020
Vvi17g0500 333 Gene3D - 133 327 IPR035952 -
Vvi17g0500 333 PANTHER RHOMBOID PROTEASE 27 327 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0500 - - vvi:100243209 643.269