Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0489 ATGGCGGGAACCCCGGCAACCCCTCTGCTGAAAGATGAGCTGGATATCGTGATACCCACGATCAGAAACTTGGATTTCTTGGAGATGTGGAGGCCGTTCTTCCAGCAATACCATCTCATCATCGTCCAAGATGGTGATCCTTCAAAGACCATCAGGGTTCCTGATGGCTTTGACTACGAGCTCTACAACCGCAACGACATTAACCGAATTCTGGGTCCCAAGGCCTCTTGCATTTCCTTCAAGGACTCTGCTTGTCGCTGCTTCGGTTACTTGGTTTCCAAGAAGAAGTACATCTACACTATTGATGACGATTGCTTCGTTGCTAAAGATCCATCTGGCAAAGACATTAATGCACTTGAGCAGCACATAAAGAACCTTCTGGCCCCATCCACCCCATTTTTCTTCAACACCCTGTATGATCCTTACCGTGATGGTGCAGATTTTGTCCGTGGATACCCATTTAGTCTCCGTGAGGGTGTCCCAACAGCTGTTTCTCATGGCCTCTGGCTTAACATCCCAGATTATGATGCCCCCACCCAGCTTGTCAAGCCGCGGGAGAGAAATACTAGGTATGTAGATGCCGTTATGACAATACCAAAGGGGACTCTTTTCCCCATGTGTGGTATGAATCTGGGTTTCAACCGAGAGTTGATTGGCCCTGCTATGTACTTTGGACTTATGGGTGATGGTCAGCCAATTGGACGCTACGATGATATGTGGGCTGGCTGGTGCACCAAGATCATATGTGACCACATGGGGTTGGGAATCAAGACAGGTCTGCCCTACATCTGGCACAGCAAAGCAAGCAACCCTTTTGTGAACCTTAAAAAGGAGTACAAAGGTATTTACTGGCAGGAGGAGCTGATCCCATTTTTCCAGTCTGTTATTCTTCCGAAGGAATGCACTACTGTTCAAAAATGCTACATTGAACTCTCCAAGCAAGTTAGGGCAAAGCTAGGGAAAGTTGATGAATACTTTATCAAGCTGGCTGATGCCATGGTCACATGGATTGAGGCATGGGATGAGCTCAACCCATCTGGAGCTTCTGCTGAAGTACGCAATGGTCCTGCAAAATAG 1077 0.4763 MAGTPATPLLKDELDIVIPTIRNLDFLEMWRPFFQQYHLIIVQDGDPSKTIRVPDGFDYELYNRNDINRILGPKASCISFKDSACRCFGYLVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLAPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVMTIPKGTLFPMCGMNLGFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCTKIICDHMGLGIKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVILPKECTTVQKCYIELSKQVRAKLGKVDEYFIKLADAMVTWIEAWDELNPSGASAEVRNGPAK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0489 358 PANTHER UDP-ARABINOSE MUTASE 1 346 IPR037595 -
Vvi17g0489 358 PIRSF UPTG 4 348 IPR004901 GO:0016866|GO:0071669
Vvi17g0489 358 Pfam Reversibly glycosylated polypeptide 10 344 IPR037595 -
Vvi17g0489 358 SUPERFAMILY Nucleotide-diphospho-sugar transferases 35 240 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0489 Vvi-Chr17 5514288 5516806 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0489 K13379 - vvi:100246811 756.903