Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0484 ATGGGTCGGGCACGTACCAGACTGCCTAGTCTGTGCGCGAGTCGCGCCATGGCTCGCGTTCGAGTTCGTTCCTGGACTCCATGGTCCAAACCCACTTCCAATTCCATTCAACGTGGTTGGAAAAATGAGTTTTCCGGCAATGGCATGGGGAAGAGCTTTAGCAGTAACGTGGAGATGGGATGGTGCGGAGGTGGGAATAGGATCATGGTGGTGGTTGATTCAAGTATTGAAGCTAAGGGAGCTCTGGAATGGGCACTGTCTCATGCTGTTCAACCCCAGGACACTCTACTTCTTTTTCATGTGACTAAGTCCACCAGATCAGGTGTAGATTCCAGTAGGGACCTTAATCAAAAGGCTTATCAACTTCTCCAATCTATGAAAAACATGTCCCAGATGAGAAAGCCTGGGGTGCAAGTGGAGATAGCACTGCAGCAAGGGAAGGAAAAGGGTCCAACAATAGTGGAAGAAGCAAAGCAACAGAGGGTGTCACTGTTGATCCTAGGAAAAAGAAAACAATCATCAATGGTGTGGTGTGGGTTGGTGAAGTGGGCAACAGACAGGATCTGCAGAGGTGTTGTGGACTACTGCATACAAAATGCTGACTGCATGACAGTTGCAGTGAGGAGGAAGGGCAAGAAACTTGGAGGGTATTTGATTACCACTAAAAATCATAAGGATTTTTGGCTTTTGGCTTAA 696 0.477 MGRARTRLPSLCASRAMARVRVRSWTPWSKPTSNSIQRGWKNEFSGNGMGKSFSSNVEMGWCGGGNRIMVVVDSSIEAKGALEWALSHAVQPQDTLLLFHVTKSTRSGVDSSRDLNQKAYQLLQSMKNMSQMRKPGVQVEIALQQGKEKGPTIVEEAKQQRVSLLILGKRKQSSMVWCGLVKWATDRICRGVVDYCIQNADCMTVAVRRKGKKLGGYLITTKNHKDFWLLA* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0484 231 CDD USP_Like 67 207 - -
Vvi17g0484 231 Gene3D HUPs 66 214 IPR014729 -
Vvi17g0484 231 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 66 212 - -
Vvi17g0484 231 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 231 - -
Vvi17g0484 231 Pfam Universal stress protein family 67 208 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0484 Vvi-Chr17 5431008 5432328 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0484 - - vvi:100258791 463.766