Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0480 ATGAAGTATGAGGATATGAAGAAGGATTCACCATTTCATCTCAAGAGGCTAGCAGAGTTTATGGGCTGCCCCTTCTCTTCAGAAGAAGAAAGGCAAGGCGTGGTGCATGAAATTCTAAAGCTTTGCAGCTTTGAGAATCTAAGCAACCTGAAAGTGAATAATACAGGAACATTCCAGCTAGGCAAACGTAAGATTGGCAAGCATATATTCTTCAGGCAAGGTAAGGTTGGGGATTGGAGGAATCATCTCACAAATGACATGGTGGATCGCCTTAACAAGATCGTAGAGCAAAAGCTGTCTGGTTCTGGTTTGACATTTCATGACTCTGTGGAGAGATGA 339 0.4277 MKYEDMKKDSPFHLKRLAEFMGCPFSSEEERQGVVHEILKLCSFENLSNLKVNNTGTFQLGKRKIGKHIFFRQGKVGDWRNHLTNDMVDRLNKIVEQKLSGSGLTFHDSVER* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0480 112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 107 IPR027417 -
Vvi17g0480 112 Gene3D - 1 108 IPR027417 -
Vvi17g0480 112 PANTHER SULFOTRANSFERASE SULT 1 100 - -
Vvi17g0480 112 Pfam Sulfotransferase domain 1 103 IPR000863 GO:0008146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0480 Vvi-Chr17 5393704 5394042 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0480 - K01025 vvi:100246800 233.417