Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0478 ATGGCCACTGTTCACCCTCCTGAGAAATCTTTGGTGCGGGAGGATGAAGATGACAAAGAGAAGGCCAGAAAAAGAAACAATGAGATCATATCAAGCCTTGGAAAAGAAGAAGGCTGGATGGAAGAGTATACGTATGAATACCAAGGTTTTTGGTACCCTTCAGTTACTCTAGTAGAAGGAGTCATGTGGGTGCAGCAAAACTTCAAGCCGCGCCATGAAGATATTCTTCTGGTCACCCTTCCCAAATCTGGCACAACATGGTTCAAACCTCTCATGTTTGCTGTCATGAACCGAACCCACTTTGATCTCTCAACACACCCTATTCTCACCACCAGTCCCCATGATCTTGTTCCCTTCTTGGAACTGTACCTCAGCCACAAGATCCCCTTCCCAAATCCGGATACTTTCTATCCACCTCAACTCTTCCAGACCCACATCCCTTTTACTTCATTATCACAATATGTAATGGAATCTCAGTGTCGAATTGTCTATATTTGCCGAAATCCGAAAGATGTGTTTGTTTCTACATTTTACTTCCTAGAGAAAGTGAGAGATAAGAAGTTAACACCCCTTTCACTTGAGAAGGCATTTGAGCGGTTCTGTAAAGGGGTCTCTCTGTATGGACCCTTCTGGGATCATGTATTAGGGTACTGGAAGGCAAGCTTGGAAGTGCCTGACAGGGTGCTGTTCTTGAAATACGAAGATATGAAGAGGGACTCCTCTTTTCATCTCAAAAGATTGGCAGAATTCATGGGCTACCCTTTCTCTGTAGAGGAAGAAAAACAAGGAGTGGCGCATGACATTCTAGAGCTGTGCAGTTTCGAGAACCTAAGGAATTTGAAGGTGAACAAGACAGGAAAAATAATTACAAGTAACAATAATCAAGTGGAGAATCATAGATTTTTCAGGAAAGGTGAGGTTGGAGACTGGAAGAGACATCTAACAGCTGAGATGGAGGACGGCCTTAACAAGCTGATTGAGCAAAAGTTGGCTGGTTCTGGTTTGGCATTCCGTGACTCCTCCGAGGCATGA 1032 0.4399 MATVHPPEKSLVREDEDDKEKARKRNNEIISSLGKEEGWMEEYTYEYQGFWYPSVTLVEGVMWVQQNFKPRHEDILLVTLPKSGTTWFKPLMFAVMNRTHFDLSTHPILTTSPHDLVPFLELYLSHKIPFPNPDTFYPPQLFQTHIPFTSLSQYVMESQCRIVYICRNPKDVFVSTFYFLEKVRDKKLTPLSLEKAFERFCKGVSLYGPFWDHVLGYWKASLEVPDRVLFLKYEDMKRDSSFHLKRLAEFMGYPFSVEEEKQGVAHDILELCSFENLRNLKVNKTGKIITSNNNQVENHRFFRKGEVGDWKRHLTAEMEDGLNKLIEQKLAGSGLAFRDSSEA* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0478 343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 338 IPR027417 -
Vvi17g0478 343 MobiDBLite consensus disorder prediction 1 23 - -
Vvi17g0478 343 Pfam Sulfotransferase domain 73 334 IPR000863 GO:0008146
Vvi17g0478 343 Gene3D - 9 339 IPR027417 -
Vvi17g0478 343 PANTHER SULFOTRANSFERASE SULT 43 331 - -
Vvi17g0478 343 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0478 Vvi-Chr17 5380262 5381293 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0478 - K22312 vvi:100265628 714.146