Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0477 ATGACAACTGTTCCCTCTTCCCAGAAACTTCTGGTGCCTGGTACCAATGGCGGTGAAGAACAAGAACAAGAACAACAAAGTCATGATAGAGAAAGAAGCTTCGAAAGATACAGAGAGGTCATATCAACCCTTCCAAAAGAAAAGGGATGGACTACGGAGCATTTGTATCAATACCAAGGCTGTTGGTACCGTACCACATCTGGCATCCAAGGAGTAATATGGATGCAAGAACACTTCAAGCCACGACCTGCAGATGTTCTTTTAGTCACGCCTCCGAAATCAGGTACAACATGGTTTAAAGCTCTCCTGTTTGCTATCATGAACAGAACCCAGTTTAATACTTCAACACACCCTTTGCTTACCACTAACTCTCAATGTCGAATTGTCTATGTTTCCCGAAATCCAAAAGATGTGTTTGCGTTTGAACAGTACTGTAAAGGATTTTCTCCATACGGACCCTTCTGGGATCATATACTAGGGTATTGGAAGGCAAACTCAAAATGGCCAGAGAGGGTACTCTTATTGAAATATGAAGATATGAAGAGGGATTCCTCATTTCATCTCAAGAGGATAGCAGAGTTCATCGGTCAACCCTTCTCTTCAGAGGAAGAAAAACAGGGTTTGGTGCATGAAATTATAAAATTGTGTAGTTTTGAGAGTCTAAGTAATATGAAGGTTAACAAGACTGGAACCTTCCGAGCAGGCTACCTGACCGTGGATAAGAATTCGTTCTTTAGGAAAGGTGAGGTTGGAGACTGGAAGAATCATCTTACAGCAGAGATGGCCGAGCGCCTGGACAAGATCACTGAGCGAAATTTGGATGGTTGTGATTTCTCATTCGATGATTCCAAGGACACATGA 861 0.4251 MTTVPSSQKLLVPGTNGGEEQEQEQQSHDRERSFERYREVISTLPKEKGWTTEHLYQYQGCWYRTTSGIQGVIWMQEHFKPRPADVLLVTPPKSGTTWFKALLFAIMNRTQFNTSTHPLLTTNSQCRIVYVSRNPKDVFAFEQYCKGFSPYGPFWDHILGYWKANSKWPERVLLLKYEDMKRDSSFHLKRIAEFIGQPFSSEEEKQGLVHEIIKLCSFESLSNMKVNKTGTFRAGYLTVDKNSFFRKGEVGDWKNHLTAEMAERLDKITERNLDGCDFSFDDSKDT* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0477 286 MobiDBLite consensus disorder prediction 1 21 - -
Vvi17g0477 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 281 IPR027417 -
Vvi17g0477 286 Gene3D - 140 282 IPR027417 -
Vvi17g0477 286 Gene3D - 20 139 IPR027417 -
Vvi17g0477 286 PANTHER SULFOTRANSFERASE SULT 53 274 - -
Vvi17g0477 286 MobiDBLite consensus disorder prediction 1 33 - -
Vvi17g0477 286 Pfam Sulfotransferase domain 84 123 IPR000863 GO:0008146
Vvi17g0477 286 Pfam Sulfotransferase domain 141 276 IPR000863 GO:0008146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0477 Vvi-Chr17 5376310 5377368 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0477 - K22312 vri:117904136 534.643