Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0476 ATGGAGGTTTTTAAAGTGTTTGAATCAGCTCGTCCAGAATTTCTCAAGTATTACTCTGAGGATAAAGGTGTAGGTATCCCTGAAGAAGCTCAATCTCGTGTTTTCACTCCCCTCATGCAGGTGGGTCCATCCATTTCTAGAATACATGGGTGCACAGGTATCGGGTTAAGCATAAGCAAGTGTTTGAGGCCCAAGATTTTAGACAAAGGCTCGATGCCGGCTCCAATACACGCGAAAACCATCCATCGTGATGCAGGCGAGAGGCTCAAGGGCTTTGGTCACGTTGAGTTAGCTACTCCAGAAGCAGCACATAAGGCTTTCAAAATGAATGGTGGGGACCCCTCGAGAGACTCCAAGTACCCAGTCATCATCATCATAGCATACTCAACAGCCAATCGCTCAGGCCATGCAACTGATGTCAGGAACAAGTGGATCTCAAAACCAAGTTCCTGTAACAAAGCAAATGGAAAATCTAATGCAGATTGCATCTGCAGCAGTCCAGATCACCCATTTTACCCCCCATCTAACCCGTTTGATTCACACCTACTAAACCATTCATACCCATCACACCTAGGATGCTTCACCCACTGCCTGTTTCAAGCCCACCACATCCGTCACTCTCCATGCATAGGCACTCCAAATGGTACCTCAGAAAAGGTCAAAAGTGATTCAAAGCAAAGGCTTGAAAATGATATAACTGTTGGGTTATCTGGACATCCTCCATGGTCTTGTAGTCTTTGCAATACAAAGGCTACTAGTAAGCTAGCACAACTTCAACATGCAACAGAAGGAGAGCCCTCCATACGTGCTGCTTCTGAGTCCAAGAATAATGAAAAGATAGAAGCAGAGGAAGCTAAAATTTCAGAGGGTAGTCAAGCTGAATTTGATGAGGCAATTGACATCACTGACGCGTGGCACGTGTTATCAGCCGGACCATCATCATCCGGATTCCCCTAA 957 0.4577 MEVFKVFESARPEFLKYYSEDKGVGIPEEAQSRVFTPLMQVGPSISRIHGCTGIGLSISKCLRPKILDKGSMPAPIHAKTIHRDAGERLKGFGHVELATPEAAHKAFKMNGGDPSRDSKYPVIIIIAYSTANRSGHATDVRNKWISKPSSCNKANGKSNADCICSSPDHPFYPPSNPFDSHLLNHSYPSHLGCFTHCLFQAHHIRHSPCIGTPNGTSEKVKSDSKQRLENDITVGLSGHPPWSCSLCNTKATSKLAQLQHATEGEPSIRAASESKNNEKIEAEEAKISEGSQAEFDEAIDITDAWHVLSAGPSSSGFP* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0476 318 MobiDBLite consensus disorder prediction 272 293 - -
Vvi17g0476 318 MobiDBLite consensus disorder prediction 261 293 - -
Vvi17g0476 318 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 17 61 IPR036890 -
Vvi17g0476 318 Gene3D - 4 65 IPR036890 -
Vvi17g0476 318 PANTHER TWO-COMPONENT HISTIDINE KINASE 20 62 - -
Vvi17g0476 318 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 20 62 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0476 Vvi-Chr17 5354564 5357443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0476 7 62 Miscellaneous Gene Families AT1G27320 71.930 2.95e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0476 K14489 - vvi:100247122 82.0333