Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0473 ATGGGTTGGGCAATAGCATTACATGGCGGCGCCGGCGACATTCCGCTCTCTCTGCCGCTGGAACGCCGTGAGCCGCGAGAAGCCGCTCTCCGCCACTGCCTCCAGATCGGCGTCGCCGCTCTCCAGACCAAACGCCCTCCACTGGACGTCGTCGAACTTGTGGTTCGTGAGCTAGAAAACAACCCAAACTTCAATGCCGGCAGAGGGTCTGTGCTAACCACCGATGGTACGGTCGAAATGGAAGCTTGCATCATGGATGGAAACACGAAGAAATGTGGAGCTGTTTCGGGTCTTACCACTGTTGTTAATCCCATATCCCTAGCAAGGCTGGTTATGGAGAAAACCCCTCATATATATCTTGCATTTGATGGGGCAGAGGCATTTGCAAGGGAACAAGGTGTTGAAACTGTTGATGCAAGTCATTTTATTACTCCTGAAAATATTGAAAGGTTGAAGCAAGCAAAAGAAGCCAATAGAGTGCAAATTGATTATACACAACCTATTACAAAAGACACGAAGAAAGAAACACCAACTGCTGATGGTGATAGCCAGATTGGAACGGTGGGATGTGTGGCTGTTGACACTCGTGGAAATTTAGCAGCTGCTACTTCTACTGGTGGACTGGTTAACAAAATGGTGGGCAGGATTGGGGACACACCCATTGTAGGTGCAGGGAACTATGCTAACAGCCTGTGTGCAGTCTCTGCCACAGGAAAAGGCGAAGCAATAATATGTGGTACTGTTGCAAGAGATGTGGCAGCTCTCATGGAGTACAAAGGGCTTTCGCTCGAGGAAGCAGCAGCGTATGTCATATCGGAGTGCACTCCAAGAGGCACTGCAGGCTTGGTTGCTGTTTCTGCCACAGGAGAAGTCACCATGCAGTTTAATACAACAGGTATGTTCCGAGCTTGTGCTTCAGAAGATGGGTATTCGGAGATTGGAATATGGCCAAATTCTATGCAAAACTGA 969 0.4902 MGWAIALHGGAGDIPLSLPLERREPREAALRHCLQIGVAALQTKRPPLDVVELVVRELENNPNFNAGRGSVLTTDGTVEMEACIMDGNTKKCGAVSGLTTVVNPISLARLVMEKTPHIYLAFDGAEAFAREQGVETVDASHFITPENIERLKQAKEANRVQIDYTQPITKDTKKETPTADGDSQIGTVGCVAVDTRGNLAAATSTGGLVNKMVGRIGDTPIVGAGNYANSLCAVSATGKGEAIICGTVARDVAALMEYKGLSLEEAAAYVISECTPRGTAGLVAVSATGEVTMQFNTTGMFRACASEDGYSEIGIWPNSMQN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0473 322 FunFam Isoaspartyl peptidase/L-asparaginase 187 318 - -
Vvi17g0473 322 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 315 IPR029055 -
Vvi17g0473 322 Pfam Asparaginase 3 316 IPR000246 GO:0016787
Vvi17g0473 322 CDD Asparaginase_2 4 309 - -
Vvi17g0473 322 Gene3D (Glycosyl)asparaginase 187 319 - -
Vvi17g0473 322 PANTHER L-ASPARAGINASE 3 315 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0473 Vvi-Chr17 5315093 5317941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0473 5 251 Miscellaneous Gene Families AT4G00590 25.275 2.36e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0473 K13051 - vvi:100250923 615.92