Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0468 ATGGTCAGGAATTCACTAGGATTAAATAGTCTCATGGCAAGGAAAGGCATGATAGATGGAGGAGAGCAGATAACACGGCATACTGCACCTTCCATTGAATCGGAAGAGAATGACAGAAGAACATACATTTATACTGATGAGAGTGCACTTTTGGACTGTGAAATGCCAGAGCTGGTTGTTTTTCTTCAGGAGAGCAAGTACCAGGCTATCAAGGACTTTTGTACTGATGGGGAAGTGCCTTTGCACGCAAAGTCATTGACAGAAAATTGTGGGTTGGATCATAATATTGTCTCTTGTTTGCTGAACTCCGATGCAGACAGTAGTGAATTACCCAAAGAAAGACAGAGCACACAGTCCTCCATTTCAAACAGTTCAAATTCTTTCATCCAGCATGATTGCAACGATTATGTTGTTGAGCAATGTGGTTCCAGGGACTTGGAGAAAAAAATTGAAATAGATTTTGATGCAAGAGATAGGGTTTCAATTGAAGGATACACTGGGAGGATTACACCTGAAACACAGTGTCTGGTTGGAGAGGCGGGTAGCAATTGCTATCACTTTGAGTTATCCAATCCCATTGGACATGGATGTGGACAAAAATGTTATCAGGGTTCTAGTGAGGAAGCAGTCTTGGCAAACTCTTTGCTATATCCTGCACCTGAAGAAATCAGCAGCAGGCGCCATGCAATTGAGGCCTCTTTCAGAAGTGAGATCAAGAGTGAAAGCATCCCTCTAGATATTGATTCATCTATAGCCACAATCAGCAGCAGAGAAAAAGAGCCGCGAGTAGTGGACTGTCAACAACATTTTGAAACCGAAAATTTGTTTAGACTTGATGACGGTGCTTCAGAAAGTTTAACAGTTTCAACTCAAAGTCTTGTTATTCAAAATGGTCATGAAGAGTCCAGTTTCTCTACACCTGGCCCTCTTTCAAACTCCATAGCATTCTCAGGACCAATATCATATTCTGGCAGCATGTCTCTCCGGTCAAATAGCAGCACACGGTCCTTCGCTTTTCCCATATTACAATCTGAATGGAATGGAAGCCCGGTGAAAATGATAGAACCTGACAGAAGACACTCTAGGAAGTGCCGACCTTGGAAGTTACATTATCTCTGCTGTAAATTCTAA 1131 0.4218 MVRNSLGLNSLMARKGMIDGGEQITRHTAPSIESEENDRRTYIYTDESALLDCEMPELVVFLQESKYQAIKDFCTDGEVPLHAKSLTENCGLDHNIVSCLLNSDADSSELPKERQSTQSSISNSSNSFIQHDCNDYVVEQCGSRDLEKKIEIDFDARDRVSIEGYTGRITPETQCLVGEAGSNCYHFELSNPIGHGCGQKCYQGSSEEAVLANSLLYPAPEEISSRRHAIEASFRSEIKSESIPLDIDSSIATISSREKEPRVVDCQQHFETENLFRLDDGASESLTVSTQSLVIQNGHEESSFSTPGPLSNSIAFSGPISYSGSMSLRSNSSTRSFAFPILQSEWNGSPVKMIEPDRRHSRKCRPWKLHYLCCKF* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0468 376 PANTHER 18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-LIKE PROTEIN 26 376 IPR040378 GO:0009786
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0468 Vvi-Chr17 5244356 5245925 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0468 - - vvi:100853633 736.102