Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0464 ATGGATTTATGGCTCAAAGCTCGAAGCTTCGCGGAAGAAGCCGCGAAGCGATCCCAAGAACTAACCATTGGAACCACTAAAATCTCCGATATCGTCTCCGAAACGGCGAAGAGATCAAAGGAGATTGCCTCAGAAACGGCTAAGAGATCTAAGGAGATTGCCTCGGAAACGGCAAAGCGATCAAAAGAAATTGCCGTGGAGGCTTCAAAGAGAGCCGACCAGATCAAGATTGAAGCCCTTAAAGGAGCCGACAAGATCAAGTTGCTCGCGGATGGGATCTCTCCGTCCGTTCGTTCCTCGCCGGAGACAGAGGCTTCGGATCTGGAGAAGTTCGGTGTTACTGATGAGTTGGGGGAGTTCGTGAAGGGAATTACTATGAATACATTTCAGGATTTCCCTTTGGAAGATGATACAGAGATGTCTGATGTGCCAACAGTCTCAAATGTTCGGCAGGATCTTACACAATGGCAAGAAAGGCATGCCAATCTTGTTCTCTCAACAGTCAAGGAAGTTTCAAAGCTAAGATATGAGTTATGCCCACGTTTTATGAAAGAAAGGAAGTTCTGGAGGATATATTTCATATTAGTGAACAGTCATGTGGCTCCGTATGAGAAGCAGTACATGGAGGATGTAAAGCAAAAGTCTGCAGAAGAAGAAAAAGAAGATAATGTGAAGGAAATTCCAAAAGCTGGAACAACTGTTAAAGTAGAGGCAAAGGAATCAAACAAGCAAAGCAGAACTTCAACCTCATCTGCTACAGAACAGGACTTGGATGTATTTCTCCTGGGAGATCTTGGAGACAGTGATGAGGGCCCAGATGATGGTGATGAAGGCTATGGTGATGAAGGCTTTGACGACGATTTTGACAAGATAGTGAATAGTTCGGATGATGAAAAGGAGAAATTGTAA 909 0.4444 MDLWLKARSFAEEAAKRSQELTIGTTKISDIVSETAKRSKEIASETAKRSKEIASETAKRSKEIAVEASKRADQIKIEALKGADKIKLLADGISPSVRSSPETEASDLEKFGVTDELGEFVKGITMNTFQDFPLEDDTEMSDVPTVSNVRQDLTQWQERHANLVLSTVKEVSKLRYELCPRFMKERKFWRIYFILVNSHVAPYEKQYMEDVKQKSAEEEKEDNVKEIPKAGTTVKVEAKESNKQSRTSTSSATEQDLDVFLLGDLGDSDEGPDDGDEGYGDEGFDDDFDKIVNSSDDEKEKL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0464 302 Coils Coil 292 302 - -
Vvi17g0464 302 ProSiteProfiles BSD domain profile. 157 200 IPR005607 -
Vvi17g0464 302 MobiDBLite consensus disorder prediction 267 284 - -
Vvi17g0464 302 MobiDBLite consensus disorder prediction 214 228 - -
Vvi17g0464 302 MobiDBLite consensus disorder prediction 285 302 - -
Vvi17g0464 302 MobiDBLite consensus disorder prediction 39 62 - -
Vvi17g0464 302 Gene3D BSD domain 126 226 IPR035925 -
Vvi17g0464 302 MobiDBLite consensus disorder prediction 214 302 - -
Vvi17g0464 302 Pfam BSD domain 154 200 IPR005607 -
Vvi17g0464 302 PANTHER BSD DOMAIN-CONTAINING PROTEIN 4 288 - -
Vvi17g0464 302 SMART wurzfinal6 148 200 IPR005607 -
Vvi17g0464 302 SUPERFAMILY BSD domain-like 112 205 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0464 Vvi-Chr17 5199488 5205629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0464 2 272 EF-hand Containing Proteins AT1G69030 53.633 1.84e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0464 - - vvi:100252678 529.25