Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0460 ATGTCTCGTGAGTTGGATAGTCCCGTTCAGACCCAGATGGCTGTTGCAGTTCCCAATGGCCCATGCACTGGTGAGTACCATGTGAGCACCAGAACGGAGGGAAAACCTGCTGGAAGGAGGCGTGTTTTTGTTCAAACCGAAACTGGGTGTGTTCTGGGAATGGAGTTGGATCGCAGTGACAATGCCCATACAGTGAAAAGGAGGTTGCAACTTGCCTTAAATGTTCCCACTGAGGAGAGCTCTTTGACATTCGGGGATTTGATCCTGAACAATGATCTTAGTGCGGTTCGAAATGATTCCCCGCTTCTTCTCACAAGGAACTGCCTTCACAGAAGCTCTTCAACTCCGTGTCTCTCGCCTACTGGAAAGAATCTCCAGCAAAGAGACCAGAGTGGTCCTATTGAGATATTAGGGCGCTTTGGTCGCTTGGCTAGAATAAATGAACTGGTTAAGGACATCGTGACAGCAGTTAAACATGGTGTTGATCCCATCCCTGTCCACAGTGGCCTTGGAGGTGCTTACTATTTCAGAAACAAAAAAGGTGAGAGTGTCGCCATTGTGAAACCAACGGATGAGGAACCTTTTGCACCAAACAATCCAAAAGGTTTCATAGGTAAAGCTCTTGGGCAGCCTGGCCTAAAGCGTTCAGTGCGTGTTGGAGAAACGGGGTTCCGTGAAGTGGCTGCCTACCTTTTGGACCGAGATCATTTTGCCAATGTGCCAGCAACCGTTCTTGTGAAAATCACACACTCAGTCTTTAATGTCAATGATGGAGTGAATGGAAACAAGCTTCACAACAGGAAAAAAGTCAGCAAGATTGCATCTCTCCAGCAGTTTATTCCTCATGACTTTGATGCCGGTGACCATGGAACATCAAGCTTTCCAGTTGCCGCTGTACATAGAATAGGGATATTAGATGTTAGAATCTTTAACACTGACAGGCATGCAGGAAACCTTCTGGTCAGAAAGCTTGATGGAGTTGGGACGTTTGGTCAGGTGGAGCTCATTCCAATTGATCATGGCCTTTGCCTGCCAGAGAGCTTGGAAGATCCGTATTTTGAGTGGATCCATTGGCCTCAGGCGTCAATTCCCTTCTCTGAGGATGAGCTTGAGTATATAAACAATCTTGACCCCGCTCGTGATTCTGAGATGCTGCGGATGGAGCTGCCCATGATTCGAGAGGCCTGCCTCCGGGTTCTGGTGCTATGCACAATTTTTCTCAAGGAAGCAGCAATTTTTGGACTCTGTCTTGCTGAGATTGGTGAGATGATGAGTAGGGAATTTCGGTGCAACTATGAGGAGCCAAGTGAGCTTGAGGTTGTATGCCTTGAGGCGAGGAGGATCTTAGCTGATAGAGAGGTGATAGTTTTAGATGCGGAAGGAGGAGAGCAAGAGTTTCAGTTTGATTTAGATTGTGAGGATGCAGAAGTTGATATGCCTCCAAAGCTGTCAAGGGATTACCTGAAAAAAGGGTCATCTCAGAATGGGTTCAAAGGTGTGCCTGGTCGAAATCCTCTCTCTAGACTGGATGAGTGTAGTGAAGAGGATGAAATTGAGGTAGATGGTGGGCTGGGTTGGGACCAGTTTCAAAATGTTGCAAAGCTGTCCATCTCAATGAAAAAAGTTGGCTTGGGTGAGAGGAACCTGTGGAATTATGGTGGTATACCCAAAGGCGCTCGTGCAGGAGGGGGTACATCATCTGGGAACAGAAGGAGTGCAAATGAGCAGCTAGCGGCGACCACGAGCTTTGTGACCCTTGCAGACATGAGTGAGGAGGAGTGGAACCTTTTCCTTGAAAGGTTCAAGGAACTTCTTTATCCTGCTTTTGCTAATCGACAATCTGCAACCCTTAGGCAGAGACAGAGGCTCGGATCTTCATGCCAATTTTGA 1890 0.4746 MSRELDSPVQTQMAVAVPNGPCTGEYHVSTRTEGKPAGRRRVFVQTETGCVLGMELDRSDNAHTVKRRLQLALNVPTEESSLTFGDLILNNDLSAVRNDSPLLLTRNCLHRSSSTPCLSPTGKNLQQRDQSGPIEILGRFGRLARINELVKDIVTAVKHGVDPIPVHSGLGGAYYFRNKKGESVAIVKPTDEEPFAPNNPKGFIGKALGQPGLKRSVRVGETGFREVAAYLLDRDHFANVPATVLVKITHSVFNVNDGVNGNKLHNRKKVSKIASLQQFIPHDFDAGDHGTSSFPVAAVHRIGILDVRIFNTDRHAGNLLVRKLDGVGTFGQVELIPIDHGLCLPESLEDPYFEWIHWPQASIPFSEDELEYINNLDPARDSEMLRMELPMIREACLRVLVLCTIFLKEAAIFGLCLAEIGEMMSREFRCNYEEPSELEVVCLEARRILADREVIVLDAEGGEQEFQFDLDCEDAEVDMPPKLSRDYLKKGSSQNGFKGVPGRNPLSRLDECSEEDEIEVDGGLGWDQFQNVAKLSISMKKVGLGERNLWNYGGIPKGARAGGGTSSGNRRSANEQLAATTSFVTLADMSEEEWNLFLERFKELLYPAFANRQSATLRQRQRLGSSCQF* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0460 629 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 160 457 IPR000403 -
Vvi17g0460 629 CDD Ubl_ubiquitin_like 42 92 - -
Vvi17g0460 629 Pfam Phosphatidylinositol 3- and 4-kinase 170 419 IPR000403 -
Vvi17g0460 629 MobiDBLite consensus disorder prediction 17 38 - -
Vvi17g0460 629 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 11 625 IPR044571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0460 Vvi-Chr17 5160826 5162715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0460 1 629 Acyl Lipid Metabolism Gene Families AT1G26270 65.156 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0460 - - vvi:100242446 1263.44