Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0458 ATGACCGCCCTCGACTCTGGCGCCGGCGCTCACGTCCTGGTGTTTCCATTCCCTTCACAAGGCCACATGATACCTCTCCTGGACCTCACCCATCAACTCGCCACCCGCGGGTTATCCATCACCGTCCTCGTCACCCCACAAAACCTCTCTCTCCTTAACCCTCTTCTCTCTAAACACCCATCCATCAGAACCCTAGTCTTGCCTTTTCCGCCGCACCCTTCGATTCCTGCCGGCGTGGAGAACTCCAAAGACCTGTCGGGCAAGTACTTCGGTGCTATGCTAATCACCCTAGGCGAACTCTACAATCCTATCGTCGATTGGTTCAGAACCCACCCTTCTCCTCCGGTGGCCATTATCTCCGATATGTTCCTTGGATGGACCCAGCAGCTTGCATGCGAGCTCGGCATTCACCGCGTCGTGTTCTCTCCCTCTGGCGCTATGTCGCTGTCCGCCATGTATAGCTTGTGGAGGGACCTACCAAAAATTGAAGACCCCACCAATCTAAAGGCTACCATTTGCTTTTCAAAAATGCCAAATTCGCCGGTTTTGGCCTGGTGGCAAGTCTCTGGTTTATATCGTAGATATATTGAAAGAGCGCCATTTTCAGAATTCACCAAAGATATATTTCGGGGCAATATAGCGAGTTGGGGGCTGGTGATTAACTCGTTCACTGAGTTGGAAGGAGACTATTTGGATTATCTGGCGAATGAGTTGGGCCACGATAGAGTTTGGGATGTTGGGCCGTTACATTTTCTTGATGGAGAAAAATCTGGGCTAATGGATAGGGGCGGGCCCAGTTCGGTTTCGGCTGACGACATACTGACGTGGCTGGACACGTGCGGAGATAACAAGGTGGTCTACGCGTGCTTCGGAAGCCAAGCGGTGTTGAATAACAGGCAAATGGAGGGCCTGGCACTAGGCTTGGAGAAGAGCGGGGCCAGGTTTATCTGGTCCATCAAGGAGCCCACGAATGAGCACGTGGAGGGAGATCACTGGGCACTCCCACCTGGATTCGAAGATCGTGTGGCTGGGACTGGGAGAGGCCTTATAATAAGAGGGTGGAGCCCACAAGTCATGATACTGAGTCACCGAGCCGTGGGCGCGTTCTTGACTCATTGCGGGTGGAATTCGATACTAGAAGGACTTGTGGCTGGGGTGTCGATGCTTGCATGGCCCATGGCGGCTGACCAGTTTTTGAACTCAATTCTGTTGGTCAACGAGTTGAAGGTGGCGGTGAAGGTGTGCGAGGGGGCAGAAAGTGTTCCTGACTCGACCGAGTTGGCTCGAGCTGTGACGTTGTCGGTGAGTGAGAACTGGGCAGCGAGAGAGCGGGTCACCGAGTTAAGAAGGGCAGCGGTGGAAGCAATCAAACCAGGAGGGAGTTCAGCGAAGAATTTAGATGCATTGGTGAAGCATTTATCCGAATTCAATTTACAGGAAAAATAA 1446 0.527 MTALDSGAGAHVLVFPFPSQGHMIPLLDLTHQLATRGLSITVLVTPQNLSLLNPLLSKHPSIRTLVLPFPPHPSIPAGVENSKDLSGKYFGAMLITLGELYNPIVDWFRTHPSPPVAIISDMFLGWTQQLACELGIHRVVFSPSGAMSLSAMYSLWRDLPKIEDPTNLKATICFSKMPNSPVLAWWQVSGLYRRYIERAPFSEFTKDIFRGNIASWGLVINSFTELEGDYLDYLANELGHDRVWDVGPLHFLDGEKSGLMDRGGPSSVSADDILTWLDTCGDNKVVYACFGSQAVLNNRQMEGLALGLEKSGARFIWSIKEPTNEHVEGDHWALPPGFEDRVAGTGRGLIIRGWSPQVMILSHRAVGAFLTHCGWNSILEGLVAGVSMLAWPMAADQFLNSILLVNELKVAVKVCEGAESVPDSTELARAVTLSVSENWAARERVTELRRAAVEAIKPGGSSAKNLDALVKHLSEFNLQEK* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0458 481 PANTHER GLYCOSYLTRANSFERASE 10 469 - -
Vvi17g0458 481 FunFam Glycosyltransferase 274 457 - -
Vvi17g0458 481 FunFam UDP-glycosyltransferase 89B1 3 272 - -
Vvi17g0458 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 272 403 IPR002213 GO:0008194
Vvi17g0458 481 CDD GT1_Gtf-like 10 473 IPR002213 GO:0008194
Vvi17g0458 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 473 - -
Vvi17g0458 481 Gene3D Glycogen Phosphorylase B; 271 457 - -
Vvi17g0458 481 Gene3D Glycogen Phosphorylase B; 3 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0458 Vvi-Chr17 5149856 5151301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0458 10 480 Glycosyltransferase AT1G73880 53.165 1.93e-176 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0458 - - vvi:104882328 966.066